Heatmap: Cluster_165 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-0.94 1.37 -3.96 - -4.95 - - -6.89 -4.72 - - - 2.33 1.35 -0.82 -3.35 -3.72 -3.32 -5.98 0.32 -1.68 -2.84 0.78 1.27 -6.61 1.25 -4.89 - -6.57 - 2.32 -1.25 -0.5 -0.07 -5.72 1.84 -1.27 0.62 0.47 - - 1.65 2.14 -3.68 2.6 -2.92 - -2.42
- - 4.11 2.89 2.48 - 2.66 - - -2.93 - - - - - - - - -2.24 - - - - -5.22 - - - - 1.27 - - - - -3.06 - - - 1.35 - - - - 1.96 - 1.11 - - -
- -7.16 - - - - - - - - - - - - - - - - - - - - - -3.92 - -3.13 - - -3.51 - - -0.53 -1.47 1.4 -1.26 -2.85 - 1.22 - - - 1.06 3.98 1.83 4.02 - - 1.84
-9.55 -8.78 -2.31 -3.06 -1.99 -4.95 -4.62 - - - -4.57 -2.7 -3.32 - - - - - - -5.79 -4.09 - - -6.12 - -5.57 - - -6.85 - -3.09 -1.4 -2.75 1.32 -8.75 - - -1.01 - - - 3.66 4.35 -1.48 3.21 - - -0.73
- -9.3 - -6.05 -3.7 - - - - - -5.14 - - -6.63 - - - - - - - - - - - -8.12 - -4.93 -5.43 - - 0.11 -2.11 2.04 -4.1 - - -2.56 -9.65 - - 4.1 2.82 -4.37 4.13 - -11.48 -1.19
-9.77 -0.56 -8.68 - - - - - - -10.12 - - - 1.88 -1.68 -7.67 -8.68 - -4.37 -1.44 0.49 -1.35 1.16 -0.35 -7.82 -0.4 -7.03 -8.37 -6.77 -6.04 -3.49 -2.25 0.21 3.57 -3.34 1.27 0.32 2.67 -5.97 - - 3.49 -1.77 -4.81 1.18 - - -7.56
- -3.88 -3.68 - -4.08 -1.54 -2.44 -1.46 -3.85 -3.96 - - -2.18 - - -4.5 - - - -4.68 - -1.85 -2.41 -5.37 - - - - - - - -0.95 -2.36 1.18 -7.16 - - -3.08 - - -1.06 3.19 4.23 -2.81 3.84 - -7.12 -4.58
- -5.95 3.59 3.87 2.57 -0.39 3.73 -6.99 -4.52 -4.73 -2.88 -8.16 - -7.26 - -8.76 - - -2.33 -5.98 - - - -8.2 - -7.0 - - -5.58 - -10.12 - -4.75 -2.05 - - - -7.92 -10.35 - - -6.74 - - -0.86 - - -
-4.96 -4.15 - 1.22 - - - - - -2.21 - -0.57 - - - - - - - -2.99 - - - -6.38 - - - - 2.41 - - - 0.79 4.31 -1.04 - - -0.97 -4.65 - - 2.13 - - 3.62 - - -
0.28 0.54 0.61 0.63 -0.02 -0.94 0.39 -7.5 -7.07 -7.89 -6.78 - -3.16 0.86 -0.26 -0.16 0.34 0.02 -2.42 0.56 0.63 0.2 0.63 0.11 -1.9 -0.05 -2.31 0.05 -1.04 -1.87 0.67 -0.07 -1.12 -0.25 0.59 0.61 -0.59 0.44 -2.37 -3.3 0.57 0.6 1.28 1.79 0.84 -2.77 0.64 0.75
- -1.84 -2.81 - - - - - -3.1 - - - - 0.85 -0.11 -2.27 -0.84 -3.22 - -3.46 - -0.35 0.85 -0.24 - -0.34 - -1.65 -4.03 - -1.56 0.31 0.11 -0.04 0.34 3.07 0.18 2.44 -3.54 - - 3.09 2.57 - 2.18 - - -2.3
1.64 -0.03 - 2.1 - - - - - - - - - 0.12 - - - - 0.82 -2.62 2.93 - - - - 1.81 - - - - - - - -1.01 -2.83 - - -0.57 - - - 2.06 2.73 - 3.74 - - -
- -7.69 - - - - -3.15 - - - - - - - -4.12 - - - - - - - - -4.08 - -4.95 - - 4.2 - -7.6 -2.62 0.45 3.38 - -5.18 - -1.41 -7.24 - - 2.58 - - 3.47 - - -
-4.17 -0.43 - - - - - - - -6.04 - - - 1.98 1.8 -2.43 -4.72 -1.36 0.82 -0.62 -4.65 -1.82 0.02 1.33 -1.4 1.31 2.35 -4.4 -1.58 -5.32 0.19 -2.52 -0.36 -1.1 0.19 1.97 3.52 1.26 -0.72 -4.48 -4.34 0.94 -2.44 - -2.11 - - -
- -5.77 - -2.28 - - -2.23 - - - - - - -2.05 - - - - - -4.39 - - - -7.79 - - - -2.16 2.23 -4.07 -3.05 1.72 0.44 0.27 -3.48 - - 1.24 -4.39 - - - -1.21 4.98 0.82 - - -
-2.3 -3.2 - - - - - - -5.85 -7.32 -5.39 - -5.59 2.45 -2.5 -3.41 -4.54 -0.72 -7.09 -2.12 -2.91 -2.94 -5.08 2.04 -5.07 0.72 -2.5 -0.92 3.81 -6.51 1.09 -6.15 0.25 1.05 1.05 -1.27 0.16 3.02 -2.73 - - -2.42 -6.65 -4.07 1.1 - - -1.13
-2.79 1.85 -2.89 -3.74 -3.16 -7.44 -3.63 - - - - - - 1.21 1.03 0.38 -1.86 -2.38 -2.63 1.89 -3.13 -0.88 0.52 -2.44 -2.58 -2.12 0.38 0.83 -3.98 -3.08 -0.76 1.74 0.12 -0.26 1.51 -0.6 -0.64 1.35 -0.76 -3.8 - 2.44 1.91 0.72 -0.2 0.2 -3.11 0.8
-1.08 0.41 -7.08 -4.58 -7.49 - -4.69 - - -9.98 - - - -0.13 0.24 -1.4 -0.41 -0.94 -0.79 0.19 -1.02 -0.13 0.02 0.42 -0.5 0.24 1.35 -1.26 1.87 -0.3 1.12 -0.1 -0.92 0.04 -0.33 1.39 1.82 1.07 -0.08 -2.38 -2.43 0.91 -0.93 -2.02 -0.2 2.46 1.75 -2.67
-3.23 -2.49 -1.05 -0.97 - - - - - - - - -2.34 2.21 0.46 1.12 -1.69 - -3.65 -3.32 - - - 2.68 -2.71 2.89 0.15 - 0.43 -4.14 -4.04 -1.65 -2.57 1.29 -0.9 0.93 -2.42 1.81 -2.89 - 2.22 2.65 -0.85 -3.26 -1.04 - -9.37 -4.94
- -2.42 0.88 -0.6 1.87 1.35 1.8 - - -4.31 - - - - - - - - -2.15 -5.67 - - - -5.89 - - - - -1.71 - -2.56 -1.18 -1.37 1.01 - - - 2.17 -5.72 - - 4.32 1.03 - 2.45 - - -4.1
-2.88 -2.68 - -9.43 -7.15 - - - - -8.88 -8.44 -4.48 - -1.47 -6.32 -5.15 -6.08 -6.62 -6.24 -2.93 -8.09 -3.71 -4.0 -4.29 1.89 -5.37 -3.9 - -8.42 1.44 0.14 0.48 1.43 3.03 -2.68 -3.87 -5.57 1.83 -3.75 -0.29 -3.93 3.55 2.17 -4.92 2.32 - - 0.05
- 1.09 - 0.08 - -0.29 0.03 - - - - - 1.97 -0.75 - - - - -0.95 0.45 - -0.44 - -1.78 - -2.15 -0.14 - -1.27 - 1.22 -1.2 -2.07 -0.46 -0.5 - 1.64 2.39 -0.17 - - - - 1.66 2.67 - - 3.43
2.1 -0.07 -4.04 -4.99 -4.34 -2.27 -4.91 -3.94 -6.5 -6.37 -8.2 - - 1.13 -0.43 -1.61 -1.06 -2.43 -3.91 -0.05 -3.28 -0.59 0.07 -0.97 -3.72 -0.7 -1.38 0.25 -1.36 -3.98 -1.17 -0.73 0.15 0.7 0.05 1.62 -0.14 1.91 -1.13 -4.22 -5.73 2.51 1.76 0.67 1.4 - 2.29 -0.04
1.35 - - - - - - - - - - - - - - - - - - - - - - -0.72 - - - - - - - - - 5.1 - - - 3.39 - - - - - - - - - -
- -0.46 3.57 - 1.09 - - - - - - -1.63 - - - - - - 2.13 -1.78 - - - -0.71 - - - - - - - -0.14 -0.86 1.31 - - - - - - - 4.13 1.61 - 1.64 - - -
-3.8 -6.52 - - - -2.14 -3.13 -3.31 - - - - - -2.94 - -2.27 - - - -2.16 1.98 - - -4.06 - - - -0.65 -4.03 - - 0.89 -2.6 -0.06 -4.05 -2.76 -1.94 -2.23 -2.78 - - 2.87 3.63 3.15 2.84 - -7.64 1.4
-1.67 0.9 -8.76 -7.19 -7.74 - -5.68 - - -9.62 -7.33 - - 1.13 0.05 -0.62 0.47 0.06 -1.4 0.81 -1.55 1.66 2.83 -0.49 -2.12 -0.28 1.64 - 1.13 -5.52 -0.01 -3.29 -0.21 -2.37 1.83 1.98 2.88 1.07 -1.95 -4.24 - -4.7 - - -2.7 - - -
- -2.88 - -0.42 - - - - - - 0.49 - 2.31 -1.04 - 0.73 - - - - - - - -1.63 - -1.97 - - - -3.21 - - -2.82 -0.24 -3.84 - 1.54 3.55 -0.56 - - 0.96 2.38 2.85 1.53 - - 2.1
-3.97 -4.46 -0.01 -1.32 -1.89 -2.91 -1.49 -1.32 - -3.98 - -0.88 - -4.22 -0.98 -4.65 - - -4.2 -4.34 - - - -2.34 - -2.91 -2.63 -1.52 0.44 -2.62 -6.02 -2.0 -1.96 0.41 -2.37 2.66 -1.07 1.31 -4.83 -1.6 - 4.01 0.69 -2.96 3.6 - - -4.64
- -4.8 - - - -1.95 0.29 -0.49 - - - - 2.26 -3.28 - - - - - -4.34 - - - -0.78 -0.28 - - 4.91 0.68 - - -2.71 -2.51 - -8.2 - - - - - - - - 0.69 2.35 - - -0.67
- - - 0.99 -0.78 - -0.65 - - - - - - - - - - - -3.31 - - -2.12 - -3.8 - - - - - - - -1.25 -2.91 -2.17 -0.81 -0.68 -0.71 -2.17 -1.64 - - - 2.86 - 5.06 - - -0.76
-3.21 - - - -0.42 -0.2 - -0.33 - - - - 1.37 - - - - - -1.44 - - - - - - - - - - - - 1.2 1.09 1.99 - - - 2.25 - - - 3.51 2.85 - 3.28 - - 0.09
- - 3.69 1.64 3.63 -2.1 1.86 - - -2.57 - - - - - - - - -4.44 - - - -2.75 - - - - - -1.17 - - -0.95 -2.66 -1.66 -4.22 - - -4.56 - - - -0.82 - 3.14 1.8 - - -0.05
-1.83 1.18 - - - - -2.81 - - - - - - -4.33 -0.78 -3.51 - - - 0.29 - - - -1.48 - -3.33 - 1.88 0.84 - 0.95 3.2 -1.5 -0.02 -0.48 - -1.09 -1.08 -4.1 - - 3.41 0.32 1.52 2.79 - - 0.65
- - -2.32 -0.27 - - -1.85 - - -4.41 - - - - - - - - -2.69 -6.55 - - - -5.77 - - -0.57 - - - - -4.76 -0.19 1.93 - - - 0.46 - - - 4.85 -0.98 - 3.38 - - -
- -2.27 -2.74 -0.67 -1.97 -4.55 -1.23 - - - - - - -3.24 0.26 -3.77 - - -3.35 -0.48 1.83 -0.82 0.21 -1.65 - -1.47 - 1.83 -0.61 - -3.92 0.05 -0.73 1.04 -0.34 -0.94 -4.16 1.2 -2.52 - - 4.23 2.15 -3.59 1.57 - - -3.01
-10.52 -3.73 -7.12 - - - - - - - - - -8.35 -3.49 -5.84 -10.25 - -10.69 - -4.78 -7.62 -9.67 -7.61 -6.61 - -7.95 -8.11 - -8.92 -11.03 -2.54 -1.3 -1.81 0.61 -4.7 -2.59 -3.06 1.05 -2.67 - - 4.22 3.13 1.72 2.25 - 1.44 2.2
-8.22 -0.25 - -5.83 -3.21 -2.96 -2.81 - - -6.17 -4.92 - - -1.76 -0.95 -4.46 - -7.28 - -0.23 0.38 -3.26 -1.99 -5.07 - -6.07 - -5.71 -4.45 - 0.36 -5.34 -1.14 0.25 -0.36 0.24 -0.28 2.6 -2.6 - - 2.75 -0.86 -3.03 4.57 - -6.01 -5.24
1.59 2.09 - - - - -5.14 - - -5.75 - -5.94 - 2.56 -1.84 -1.16 -3.34 -1.03 -2.86 0.68 -3.27 1.33 2.65 -1.69 - -1.19 0.9 -0.6 -3.2 - 1.82 -0.92 -0.13 -0.61 1.49 1.28 0.26 2.13 1.13 - - -1.43 - -2.98 -3.14 - - -2.43
- - - - - - - - - - - - - - - - - - - -1.31 4.45 - - - - - - - - - - -0.54 -3.44 -2.63 -5.14 - - -5.05 - - - 1.72 3.56 1.39 1.65 - - 1.93
- - - 1.37 - - 1.49 - - - - - - - - - - - - - - - - - - - - - 0.06 - - - 0.3 - - - - - -2.38 - - 4.99 - - 3.08 - - -
-1.13 0.17 -1.17 -1.6 -4.37 - - - - - - - - 1.76 -1.84 -3.88 - 0.55 -5.77 -1.24 - - -2.93 3.44 - 3.41 - -0.09 -0.21 -5.71 1.85 -2.91 -0.16 -0.97 0.92 0.73 -2.93 2.08 -1.43 - - 0.55 -3.82 - 0.64 - - -
- - - - - - - - - - - -1.4 - 3.63 - - - - - - - - - -4.97 - - -0.59 - -0.69 - -1.91 -0.52 -0.88 1.57 -2.79 - -0.63 -0.14 - - - 4.0 -0.37 - 3.21 - - 0.76
- -2.03 - - - - - - -3.56 - -3.24 - - -0.8 -1.12 -4.21 - -3.65 -4.05 -2.34 - -0.7 -1.62 0.29 0.73 1.09 4.38 -3.07 - - -1.7 -0.48 -0.13 0.7 -0.49 1.21 -0.35 2.61 -2.75 - - 1.62 -3.1 -2.52 1.22 - -6.62 -
- - - - - - - - - - - 3.56 2.08 - - - - - - - - - - -5.32 - - - - 2.56 - - - 1.73 2.31 - - - 2.81 - - - 1.19 - - 3.09 - - -
- -1.28 - -1.02 - - -1.22 - - - -0.72 -2.71 - 0.01 1.29 -3.12 -2.18 - -2.73 -1.93 - -2.06 -2.03 0.83 - -1.87 - 1.18 4.53 - 0.77 -3.75 0.3 -0.52 -2.47 0.71 -0.59 2.24 -1.13 1.1 - - - - -2.01 - - -
- -8.6 - - - - - - - - - -5.47 -4.55 4.23 - - - - - -7.88 -4.98 - - -9.36 - -6.99 - - -3.05 - - -3.71 -1.03 -0.5 2.3 - - 2.27 - - - 3.55 -2.18 -4.18 2.57 - - -4.96
-1.48 -1.72 -1.67 - - - - - 0.97 - -2.2 - - - - - - - -3.25 -4.39 - - - -3.68 - - - - - -3.4 -2.49 -0.98 - 1.88 - -1.62 - -0.57 -5.41 - - 4.42 2.97 - 3.22 - - -0.72
-1.06 0.42 -2.05 -1.78 -1.43 -0.33 -0.93 -0.31 -0.33 -0.89 -0.75 -3.6 -2.04 0.58 0.83 -0.26 0.48 -1.04 0.24 0.67 0.99 0.07 0.02 -0.57 0.08 -0.07 0.81 0.61 1.67 0.11 -0.82 0.37 0.04 0.49 -0.21 -0.02 0.51 1.01 0.98 -1.58 0.43 1.38 -1.39 -1.4 -1.31 -1.32 -1.45 -3.22
- -6.87 0.23 - - - - - - - - -0.95 -0.33 -3.02 - -1.74 - - -3.65 - - - - - - -5.22 - - - -0.75 -1.3 0.37 -1.93 1.85 -6.38 - - -2.38 -3.51 - - 4.03 2.83 1.94 2.83 - - 2.05
- -4.88 - - - - - - -2.81 -3.65 - 2.46 0.36 - - -2.72 -3.78 -1.16 - - - - -3.72 -4.02 - -5.61 - - - - - 1.28 -1.33 1.46 -4.32 -0.89 -2.73 -1.93 -4.88 - - 1.45 1.56 2.97 3.92 - - 2.28
- - - -2.44 - - - - -2.54 - - - - - - - - - -4.97 - - - - -2.98 - - - -3.31 -3.77 - - 0.61 -3.82 0.42 -7.74 - - -5.26 - - - -0.43 1.03 3.51 4.44 - - 3.08
-5.2 -2.87 - - - - - - - - - - - -1.17 - -2.0 - - -5.65 -0.88 - -0.74 1.22 -4.27 - -4.08 - - - -5.83 -1.52 1.14 2.62 1.94 1.84 0.83 0.08 2.19 -0.29 - - 2.36 - - 3.81 - - -
-1.19 -1.06 - - -1.86 - - - - -4.77 - - - -1.86 - -0.98 -3.33 - -0.6 -1.55 - -3.21 -0.92 -2.7 - -2.51 - -0.82 - -2.42 -0.38 0.67 1.54 2.39 0.04 -0.25 -0.09 0.65 1.38 -0.27 - 2.14 3.05 2.06 2.39 - - 1.47
0.45 1.25 -6.59 - -6.21 - - - - - - - - 0.7 -0.4 -0.25 1.07 1.22 -0.68 1.7 -1.13 0.38 0.94 0.9 - 0.6 -2.92 -1.41 0.11 - 1.4 -1.03 -0.6 0.13 0.69 1.5 0.3 1.87 -1.92 0.15 - 1.09 -1.28 -5.44 1.04 1.91 - -3.27
- 0.33 - 0.34 -1.21 - 0.1 - - - - - -0.45 - - - - - - -2.24 - - -0.68 -2.86 - -2.79 - - - - -0.53 -1.44 -1.57 0.63 3.93 0.84 - 0.46 - - - 4.33 - - -0.66 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.15 - - 0.28 1.5 - 2.96 - - 0.43 - - - 4.93 - - - - - -
- -5.07 3.72 3.75 2.45 -1.07 3.27 -3.31 -1.51 - - - - - - - -1.84 - 0.13 -5.53 - - - - - -3.85 - - -3.11 - - - -5.17 -2.13 - - -1.35 -1.6 -2.28 - - - - - 1.32 - - -
-1.78 1.19 -4.48 -6.77 - -8.22 - - - -9.32 -7.78 - - 1.62 -1.35 0.49 1.57 2.81 -1.97 1.62 -0.33 0.94 -0.26 1.15 -3.63 0.85 -0.5 -3.71 -8.04 -8.54 0.75 -1.98 0.91 1.08 0.64 2.34 0.92 1.12 -0.2 -3.76 - -1.1 -2.27 -6.07 -1.27 -4.73 - -5.1
-1.24 1.58 - - - - -7.61 - - - - - - 1.06 -0.53 -1.07 -2.94 -2.18 -1.94 1.97 -2.87 0.1 0.61 -0.55 -6.98 -0.62 -8.78 2.68 -6.24 -7.25 0.84 0.08 0.19 0.07 2.37 0.79 0.74 1.71 -2.53 -2.31 - 1.53 -0.14 1.51 0.43 -2.97 - -0.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.