1. Home
  2. Species
  3. Zygnema circumcarinatum
  4. Sequence
  5. Zci_03447.1

Zci_03447.1


Description : no annotation


Gene families : OG_01_0005039 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005039_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_03447.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT2G24765 No alias ADP-ribosylation factor 3 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g535900 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004615 phosphomannomutase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0004788 thiamine diphosphokinase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009229 thiamine diphosphate biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030975 thiamine binding IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
BP GO:0042357 thiamine diphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 129
IPR006689 Small_GTPase_ARF/SAR 165 226
No external refs found!