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  5. Zci_03984.1

Zci_03984.1


Description : RAB5 canonical effector (EREX)


Gene families : OG_01_0000176 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_03984.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Mp2g23410.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_11070V3.1 No alias phospholipase D delta 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030328 prenylcysteine catabolic process IEP HCCA
BP GO:0030329 prenylcysteine metabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001683 PX_dom 1623 1696
IPR001736 PLipase_D/transphosphatidylase 354 393
IPR000008 C2_dom 15 137
IPR025202 PLD-like_dom 674 718
No external refs found!