Zci_04468.1

Description : catalytic component CesA of cellulose synthase complex

Gene families : OG_01_0000622 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000622_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zci_04468.1
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AT4G32410	No alias	cellulose synthase 1	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G05170	No alias	Cellulose synthase family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g07800.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_7150V3.1	No alias	cellulose synthase 1	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_34520V3.1	No alias	Cellulose synthase family protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	IEP	HCCA
MF	GO:0005048	signal sequence binding	IEP	HCCA
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006621	protein retention in ER lumen	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008184	glycogen phosphorylase activity	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
CC	GO:0016021	integral component of membrane	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030118	clathrin coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030125	clathrin vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	HCCA
CC	GO:0030132	clathrin coat of coated pit	IEP	HCCA
CC	GO:0031224	intrinsic component of membrane	IEP	HCCA
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	HCCA
BP	GO:0032507	maintenance of protein location in cell	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0045185	maintenance of protein location	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0046923	ER retention sequence binding	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051651	maintenance of location in cell	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0072595	maintenance of protein localization in organelle	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027934	CES_Znf_RING	35	104
IPR005150	Cellulose_synth	414	1129

External Links

No external refs found!

Zci_04468.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation