1. Home
  2. Species
  3. Zygnema circumcarinatum
  4. Sequence
  5. Zci_04585.1

Zci_04585.1


Description : no annotation


Gene families : OG_01_0007192 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007192_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_04585.1
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Pp3c12_14900V3.1 No alias SMAD/FHA domain-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043486 histone exchange IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000253 FHA_dom 10 54
No external refs found!