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  5. Zci_04833.2

Zci_04833.2


Description : component eS24 of SSU proteome


Gene families : OG_01_0001170 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_04833.2
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT3G04920 No alias Ribosomal protein S24e family protein 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G28060 No alias Ribosomal protein S24e family protein 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g456200 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g10680.1 No alias component RPS24 of SSU proteome 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_10760V3.1 No alias Ribosomal protein S24e family protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_10870V3.1 No alias Ribosomal protein S24e family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_22220V3.1 No alias Ribosomal protein S24e family protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_19700V3.1 No alias Ribosomal protein S24e family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008097 5S rRNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
MF GO:0042301 phosphate ion binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 ion homeostasis IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055070 copper ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 cation homeostasis IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR001976 Ribosomal_S24e 27 103
No external refs found!