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  5. Zci_04997.5

Zci_04997.5


Description : nucleoporin of nuclear pore complex (GP210)


Gene families : OG_01_0002031 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_04997.5
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Zci_04997.1 No alias nucleoporin of nuclear pore complex (GP210) 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04997.6 No alias no annotation 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!