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  5. Zci_05072.1

Zci_05072.1


Description : no annotation


Gene families : OG_01_0005420 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005420_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_05072.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Mp1g25580.1 No alias Pentatricopeptide repeat-containing protein At1g26460,... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_20030V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_28760V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006353 DNA-templated transcription, termination IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
MF GO:0008705 methionine synthase activity IEP HCCA
MF GO:0008716 D-alanine-D-alanine ligase activity IEP HCCA
MF GO:0008800 beta-lactamase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid family metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0016999 antibiotic metabolic process IEP HCCA
BP GO:0017001 antibiotic catabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0030653 beta-lactam antibiotic metabolic process IEP HCCA
BP GO:0030655 beta-lactam antibiotic catabolic process IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0031419 cobalamin binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043605 cellular amide catabolic process IEP HCCA
BP GO:0044106 cellular amine metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0072338 cellular lactam metabolic process IEP HCCA
BP GO:0072340 cellular lactam catabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 591 637
IPR002885 Pentatricopeptide_repeat 254 313
IPR002885 Pentatricopeptide_repeat 327 371
No external refs found!