Zci_05832.1

Description : component VPS18 of HOPS/CORVET membrane tethering complexes

Gene families : OG_01_0004566 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004566_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zci_05832.1
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre07.g328550	No alias	Vesicle trafficking.target membrane...	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003980	UDP-glucose:glycoprotein glucosyltransferase activity	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0004181	metallocarboxypeptidase activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004525	ribonuclease III activity	IEP	HCCA
MF	GO:0005319	lipid transporter activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0005548	phospholipid transporter activity	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
BP	GO:0007009	plasma membrane organization	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008235	metalloexopeptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0008252	nucleotidase activity	IEP	HCCA
MF	GO:0008253	5'-nucleotidase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0015748	organophosphate ester transport	IEP	HCCA
BP	GO:0015914	phospholipid transport	IEP	HCCA
MF	GO:0016603	glutaminyl-peptide cyclotransferase activity	IEP	HCCA
MF	GO:0016755	aminoacyltransferase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016856	racemase and epimerase activity, acting on hydroxy acids and derivatives	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0017121	plasma membrane phospholipid scrambling	IEP	HCCA
MF	GO:0017128	phospholipid scramblase activity	IEP	HCCA
BP	GO:0017186	peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	IEP	HCCA
BP	GO:0018199	peptidyl-glutamine modification	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034204	lipid translocation	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0045332	phospholipid translocation	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0050043	lactate racemase activity	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
MF	GO:0070006	metalloaminopeptidase activity	IEP	HCCA
BP	GO:0097035	regulation of membrane lipid distribution	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140303	intramembrane lipid transporter activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000547	Clathrin_H-chain/VPS_repeat	617	764
IPR007810	Pep3_Vps18	269	423

External Links

No external refs found!

Zci_05832.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation