Zci_05931.1

Description : component Sec23 of Sec23/24 cargo adaptor subcomplex

Gene families : OG_01_0001544 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001544_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zci_05931.1
Cluster	HCCA: Cluster_186

Target	Alias	Description	ECC score	Gene Family Method
AT1G05520	No alias	Sec23/Sec24 protein transport family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23660	No alias	Sec23/Sec24 protein transport family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G14160	No alias	Sec23/Sec24 protein transport family protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g12190.1	No alias	component Sec23 of Sec23/24 cargo adaptor subcomplex	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_940V3.1	No alias	Sec23/Sec24 protein transport family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006812	cation transport	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
MF	GO:0008324	cation transmembrane transporter activity	IEP	HCCA
MF	GO:0008800	beta-lactamase activity	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
CC	GO:0016021	integral component of membrane	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016812	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	IEP	HCCA
BP	GO:0016999	antibiotic metabolic process	IEP	HCCA
BP	GO:0017001	antibiotic catabolic process	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
BP	GO:0030653	beta-lactam antibiotic metabolic process	IEP	HCCA
BP	GO:0030655	beta-lactam antibiotic catabolic process	IEP	HCCA
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	HCCA
CC	GO:0031224	intrinsic component of membrane	IEP	HCCA
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0043605	cellular amide catabolic process	IEP	HCCA
BP	GO:0044106	cellular amine metabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0072338	cellular lactam metabolic process	IEP	HCCA
BP	GO:0072340	cellular lactam catabolic process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006896	Sec23/24_trunk_dom	123	394
IPR006895	Znf_Sec23_Sec24	56	94
IPR006900	Sec23/24_helical_dom	526	624
IPR007123	Gelsolin-like_dom	641	691
IPR012990	Sec23_24_beta_S	405	512

External Links

No external refs found!

Zci_05931.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation