Zci_06955.1

Description : no annotation

Gene families : OG_01_0000128 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zci_06955.1
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
Zci_01261.1	No alias	no annotation	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03120.1	No alias	no hits & (original description: none)	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_06946.1	No alias	no annotation	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08506.1	No alias	no hits & (original description: none)	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_13566.1	No alias	no hits & (original description: none)	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_15234.1	No alias	no annotation	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_15580.1	No alias	no hits & (original description: none)	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025724	GAG-pre-integrase_dom	424	481
IPR001584	Integrase_cat-core	498	598
IPR001878	Znf_CCHC	213	227

External Links

No external refs found!