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  5. Zci_07699.1

Zci_07699.1


Description : class-III histone methyltransferase (Trx)


Gene families : OG_01_0002845 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_07699.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT4G15180 No alias SET domain protein 2 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g06500.1 No alias class III/Trithorax histone methyltransferase component... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_5920V3.1 No alias SET domain protein 2 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 43 58
IPR001214 SET_dom 2460 2514
IPR001487 Bromodomain 1913 2005
No external refs found!