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  5. Zci_07905.1

Zci_07905.1


Description : component eL24 of LSU proteome component


Gene families : OG_01_0000808 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_07905.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT2G36620 No alias ribosomal protein L24 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G53020 No alias Ribosomal protein L24e family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g391097 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g20400.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g17510.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_10770V3.1 No alias ribosomal protein L24 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_16170V3.1 No alias ribosomal protein L24 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_10840V3.1 No alias ribosomal protein L24 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_8930V3.1 No alias Ribosomal protein L24e family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_25160V3.1 No alias ribosomal protein L24 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_25170V3.1 No alias ribosomal protein L24 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
BP GO:0000966 RNA 5'-end processing IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0034471 ncRNA 5'-end processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 3 67
No external refs found!