Coexpression cluster: Cluster_56 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044271 cellular nitrogen compound biosynthetic process 9.76% (12/123) 2.74 0.0 6.5e-05
GO:0043604 amide biosynthetic process 6.5% (8/123) 3.2 3e-06 0.000101
GO:0043043 peptide biosynthetic process 6.5% (8/123) 3.21 3e-06 0.000112
GO:0003735 structural constituent of ribosome 6.5% (8/123) 3.22 2e-06 0.000128
GO:0034641 cellular nitrogen compound metabolic process 13.01% (16/123) 1.93 5e-06 0.000133
GO:0044249 cellular biosynthetic process 10.57% (13/123) 2.2 5e-06 0.000134
GO:0009059 macromolecule biosynthetic process 8.94% (11/123) 2.7 1e-06 0.000139
GO:0006412 translation 6.5% (8/123) 3.24 2e-06 0.000144
GO:0005840 ribosome 6.5% (8/123) 3.29 2e-06 0.000145
GO:0005198 structural molecule activity 6.5% (8/123) 3.1 4e-06 0.000147
GO:1901576 organic substance biosynthetic process 10.57% (13/123) 2.12 9e-06 0.00019
GO:0043229 intracellular organelle 8.13% (10/123) 2.49 1.3e-05 0.000195
GO:0043226 organelle 8.13% (10/123) 2.49 1.3e-05 0.000195
GO:0006518 peptide metabolic process 6.5% (8/123) 2.93 1.1e-05 0.000199
GO:0043232 intracellular non-membrane-bounded organelle 6.5% (8/123) 2.96 9e-06 0.000204
GO:0043228 non-membrane-bounded organelle 6.5% (8/123) 2.96 9e-06 0.000204
GO:0044237 cellular metabolic process 20.33% (25/123) 1.33 1.5e-05 0.000217
GO:0043603 cellular amide metabolic process 6.5% (8/123) 2.9 1.3e-05 0.000219
GO:0034645 cellular macromolecule biosynthetic process 7.32% (9/123) 2.54 2.5e-05 0.000348
GO:0009058 biosynthetic process 10.57% (13/123) 1.97 2.8e-05 0.000364
GO:1901566 organonitrogen compound biosynthetic process 7.32% (9/123) 2.49 3.3e-05 0.000395
GO:0009987 cellular process 25.2% (31/123) 1.09 3.2e-05 0.0004
GO:0008150 biological_process 30.08% (37/123) 0.9 7.8e-05 0.000894
GO:0043170 macromolecule metabolic process 17.07% (21/123) 1.32 9e-05 0.00098
GO:0006807 nitrogen compound metabolic process 17.89% (22/123) 1.21 0.000173 0.00181
GO:0044260 cellular macromolecule metabolic process 13.01% (16/123) 1.45 0.000251 0.002526
GO:0044267 cellular protein metabolic process 10.57% (13/123) 1.62 0.000312 0.003031
GO:0008152 metabolic process 21.95% (27/123) 0.98 0.00039 0.003647
GO:0071704 organic substance metabolic process 20.33% (25/123) 1.02 0.000437 0.003948
GO:0003674 molecular_function 40.65% (50/123) 0.6 0.000578 0.005048
GO:0003697 single-stranded DNA binding 1.63% (2/123) 5.55 0.000759 0.006212
GO:0044238 primary metabolic process 18.7% (23/123) 1.03 0.000755 0.006385
GO:0005575 cellular_component 14.63% (18/123) 1.13 0.00132 0.009607
GO:0061919 process utilizing autophagic mechanism 1.63% (2/123) 5.19 0.00129 0.009659
GO:0090575 RNA polymerase II transcription regulator complex 1.63% (2/123) 5.19 0.00129 0.009659
GO:0006914 autophagy 1.63% (2/123) 5.19 0.00129 0.009659
GO:0005667 transcription regulator complex 1.63% (2/123) 5.04 0.001607 0.011376
GO:0019538 protein metabolic process 11.38% (14/123) 1.29 0.001738 0.011986
GO:0016817 hydrolase activity, acting on acid anhydrides 4.88% (6/123) 2.01 0.003856 0.025902
GO:0015294 solute:cation symporter activity 0.81% (1/123) 7.36 0.006096 0.033982
GO:0015295 solute:proton symporter activity 0.81% (1/123) 7.36 0.006096 0.033982
GO:0015144 carbohydrate transmembrane transporter activity 0.81% (1/123) 7.36 0.006096 0.033982
GO:0005402 carbohydrate:cation symporter activity 0.81% (1/123) 7.36 0.006096 0.033982
GO:0008643 carbohydrate transport 0.81% (1/123) 7.36 0.006096 0.033982
GO:0005351 carbohydrate:proton symporter activity 0.81% (1/123) 7.36 0.006096 0.033982
GO:0110165 cellular anatomical entity 11.38% (14/123) 1.08 0.006316 0.034477
GO:0044248 cellular catabolic process 2.44% (3/123) 2.94 0.007028 0.037576
GO:0006352 DNA-templated transcription, initiation 1.63% (2/123) 4.11 0.00589 0.037637
GO:1901564 organonitrogen compound metabolic process 12.2% (15/123) 1.05 0.005842 0.038266
GO:0090304 nucleic acid metabolic process 5.69% (7/123) 1.6 0.008756 0.045879
GO:0032774 RNA biosynthetic process 2.44% (3/123) 2.77 0.009712 0.049894
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_1 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_20 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_39 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_53 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_79 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_134 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_164 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_172 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_207 0.033 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_257 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_17 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_78 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_89 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_93 0.047 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_9 0.041 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_108 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_135 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_141 0.048 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_162 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_17 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_58 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_115 0.056 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_121 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_122 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_149 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_169 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_174 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_202 0.033 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_211 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_216 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_246 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_261 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_274 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_6 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_26 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_43 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_58 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_67 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_102 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_103 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_115 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_129 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_130 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_139 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_167 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (123) (download table)

InterPro Domains

GO Terms

Family Terms