1. Home
  2. Species
  3. Zygnema circumcarinatum
  4. Sequence
  5. Zci_09028.1

Zci_09028.1


Description : subunit epsilon of CCT chaperonin folding complex (CCT5)


Gene families : OG_01_0006862 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006862_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_09028.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT1G24510 No alias TCP-1/cpn60 chaperonin family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g156750 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g17510.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_23570V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
MF GO:0005216 ion channel activity IEP HCCA
MF GO:0005261 cation channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070122 isopeptidase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 2 352
No external refs found!