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  5. Zci_09342.6

Zci_09342.6


Description : DNA replication auxiliary factor (JHS1/DNA2)


Gene families : OG_01_0000938 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000938_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_09342.6
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Zci_09342.10 No alias DNA replication auxiliary factor (JHS1/DNA2) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09342.2 No alias DNA replication auxiliary factor (JHS1/DNA2) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09342.3 No alias DNA replication auxiliary factor (JHS1/DNA2) 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09342.4 No alias DNA replication auxiliary factor (JHS1/DNA2) 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09342.8 No alias DNA replication auxiliary factor (JHS1/DNA2) 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09342.9 No alias DNA replication auxiliary factor (JHS1/DNA2) 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR014808 DNA_replication_fac_Dna2_N 523 722
IPR041679 DNA2/NAM7-like_C 1247 1436
No external refs found!