1. Home
  2. Species
  3. Zygnema circumcarinatum
  4. Sequence
  5. Zci_09453.2

Zci_09453.2


Description : no annotation


Gene families : OG_01_0002020 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002020_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_09453.2
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Mp4g18960.1 No alias DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_520V3.1 No alias DEAD-box protein abstrakt, putative 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
CC GO:0005887 integral component of plasma membrane IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP HCCA
MF GO:0008658 penicillin binding IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 278 456
IPR001650 Helicase_C 493 600
No external refs found!