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  5. Zci_10818.3

Zci_10818.3


Description : transcriptional repressor (NF-X1)


Gene families : OG_01_0003192 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_10818.3
Cluster HCCA: Cluster_379

Target Alias Description ECC score Gene Family Method Actions
AT5G05660 No alias sequence-specific DNA binding transcription factors;zinc... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR000967 Znf_NFX1 615 624
IPR000967 Znf_NFX1 529 547
IPR000967 Znf_NFX1 395 413
IPR000967 Znf_NFX1 502 519
IPR000967 Znf_NFX1 828 843
IPR000967 Znf_NFX1 700 711
IPR000967 Znf_NFX1 342 360
IPR000967 Znf_NFX1 596 605
IPR000967 Znf_NFX1 290 307
IPR000967 Znf_NFX1 449 468
No external refs found!