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  5. Zci_15588.2

Zci_15588.2


Description : deubiquitinase (UBP6-7)


Gene families : OG_01_0002618 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_15588.2
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AT1G51710 No alias ubiquitin-specific protease 6 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g726050 No alias Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g19720.1 No alias deubiquitinase (UBP6-7) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent deubiquitinase IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 73
IPR001394 Peptidase_C19_UCH 107 489
No external refs found!