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  5. Zci_15647.1

Zci_15647.1


Description : component eL8 of LSU proteome component


Gene families : OG_01_0001132 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_15647.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AT2G47610 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.21 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G62870 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g529651 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g23250.1 No alias component RPL7a of LSU proteome component 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g17650.1 No alias component RPL7a of LSU proteome component 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_24420V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_24450V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_290V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_330V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_360V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.24 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_380V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 25 117
No external refs found!