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  5. Zci_15911.1

Zci_15911.1


Description : alpha-class expansin


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_15911.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT1G26770 No alias expansin A10 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G03220 No alias expansin A13 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G55500 No alias expansin A16 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22740.1 No alias alpha-class expansin 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g26350.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004427 inorganic diphosphatase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 34 114
IPR007117 Expansin_CBD 126 207
No external refs found!