AT1G12260

Description : NAC 007

Gene families : OG_01_0000899 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000899_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G12260
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT5G62380	No alias	NAC-domain protein 101	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G66300	No alias	NAC domain containing protein 105	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	NAS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042546	cell wall biogenesis	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	RCA	Interproscan
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003878	ATP citrate synthase activity	IEP	HCCA
MF	GO:0003979	UDP-glucose 6-dehydrogenase activity	IEP	HCCA
MF	GO:0004557	alpha-galactosidase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005740	mitochondrial envelope	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006065	UDP-glucuronate biosynthetic process	IEP	HCCA
BP	GO:0006084	acetyl-CoA metabolic process	IEP	HCCA
BP	GO:0006085	acetyl-CoA biosynthetic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006637	acyl-CoA metabolic process	IEP	HCCA
BP	GO:0006672	ceramide metabolic process	IEP	HCCA
BP	GO:0006677	glycosylceramide metabolic process	IEP	HCCA
BP	GO:0006687	glycosphingolipid metabolic process	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
MF	GO:0008131	primary amine oxidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
CC	GO:0009346	ATP-independent citrate lyase complex	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009741	response to brassinosteroid	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
MF	GO:0009916	alternative oxidase activity	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010065	primary meristem tissue development	IEP	HCCA
BP	GO:0010067	procambium histogenesis	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010230	alternative respiration	IEP	HCCA
BP	GO:0010371	regulation of gibberellin biosynthetic process	IEP	HCCA
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	HCCA
BP	GO:0010393	galacturonan metabolic process	IEP	HCCA
BP	GO:0010410	hemicellulose metabolic process	IEP	HCCA
BP	GO:0010413	glucuronoxylan metabolic process	IEP	HCCA
BP	GO:0010623	programmed cell death involved in cell development	IEP	HCCA
BP	GO:0010817	regulation of hormone levels	IEP	HCCA
BP	GO:0012501	programmed cell death	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
BP	GO:0016126	sterol biosynthetic process	IEP	HCCA
BP	GO:0016128	phytosteroid metabolic process	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
BP	GO:0016131	brassinosteroid metabolic process	IEP	HCCA
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	HCCA
BP	GO:0016137	glycoside metabolic process	IEP	HCCA
BP	GO:0016139	glycoside catabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017040	N-acylsphingosine amidohydrolase activity	IEP	HCCA
BP	GO:0019377	glycolipid catabolic process	IEP	HCCA
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	HCCA
BP	GO:0022610	biological adhesion	IEP	HCCA
BP	GO:0030149	sphingolipid catabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	HCCA
BP	GO:0032885	regulation of polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0035383	thioester metabolic process	IEP	HCCA
BP	GO:0035384	thioester biosynthetic process	IEP	HCCA
BP	GO:0042445	hormone metabolic process	IEP	HCCA
BP	GO:0042446	hormone biosynthetic process	IEP	HCCA
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
CC	GO:0045298	tubulin complex	IEP	HCCA
BP	GO:0045488	pectin metabolic process	IEP	HCCA
BP	GO:0045491	xylan metabolic process	IEP	HCCA
BP	GO:0045492	xylan biosynthetic process	IEP	HCCA
BP	GO:0045597	positive regulation of cell differentiation	IEP	HCCA
BP	GO:0046398	UDP-glucuronate metabolic process	IEP	HCCA
BP	GO:0046466	membrane lipid catabolic process	IEP	HCCA
BP	GO:0046477	glycosylceramide catabolic process	IEP	HCCA
BP	GO:0046479	glycosphingolipid catabolic process	IEP	HCCA
BP	GO:0046514	ceramide catabolic process	IEP	HCCA
BP	GO:0048508	embryonic meristem development	IEP	HCCA
BP	GO:0048658	anther wall tapetum development	IEP	HCCA
BP	GO:0050826	response to freezing	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0055046	microgametogenesis	IEP	HCCA
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	HCCA
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071616	acyl-CoA biosynthetic process	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0120178	steroid hormone biosynthetic process	IEP	HCCA
BP	GO:1900030	regulation of pectin biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	8	135

External Links

PLAZA 3.0 Dicots	AT1G12260

AT1G12260

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation