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  5. AT3G08930

AT3G08930


Description : LMBR1-like membrane protein


Gene families : OG_01_0003324 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G08930
Cluster HCCA: Cluster_261


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0007033 vacuole organization RCA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000103 sulfate assimilation IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000822 inositol hexakisphosphate binding IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
CC GO:0001673 male germ cell nucleus IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0004758 serine C-palmitoyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006598 polyamine catabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006670 sphingosine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006995 cellular response to nitrogen starvation IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007602 phototransduction IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
MF GO:0008022 protein C-terminus binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
MF GO:0008430 selenium binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009409 response to cold IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009555 pollen development IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009585 red, far-red light phototransduction IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009649 entrainment of circadian clock IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
BP GO:0010031 circumnutation IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010269 response to selenium ion IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016408 C-acyltransferase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016454 C-palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0031982 vesicle IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of ion transmembrane transporter activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0040020 regulation of meiotic nuclear division IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
CC GO:0043073 germ cell nucleus IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0044070 regulation of anion transport IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046512 sphingosine biosynthetic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048468 cell development IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050879 multicellular organismal movement IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
MF GO:0051740 ethylene binding IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
BP GO:0055047 generative cell mitosis IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071291 cellular response to selenium ion IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP HCCA
MF GO:0072328 alkene binding IEP HCCA
BP GO:0080119 ER body organization IEP HCCA
BP GO:0080147 root hair cell development IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:0140014 mitotic nuclear division IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902532 negative regulation of intracellular signal transduction IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1903959 regulation of anion transmembrane transport IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
BP GO:2000037 regulation of stomatal complex patterning IEP HCCA
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 277 487
IPR006876 LMBR1-like_membr_prot 9 274
PLAZA 3.0 Dicots AT3G08930