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  5. AT3G09740

AT3G09740


Description : syntaxin of plants 71


Gene families : OG_01_0002887 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G09740
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
Cre02.g098950 No alias Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre02.g099000 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006605 protein targeting RCA Interproscan
BP GO:0006612 protein targeting to membrane IDA Interproscan
BP GO:0006886 intracellular protein transport TAS Interproscan
MF GO:0008565 obsolete protein transporter activity TAS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0016021 integral component of membrane TAS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0000919 cell plate assembly IEP HCCA
MF GO:0001735 prenylcysteine oxidase activity IEP HCCA
BP GO:0001944 vasculature development IEP HCCA
MF GO:0004656 procollagen-proline 4-dioxygenase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004707 MAP kinase activity IEP HCCA
MF GO:0005483 soluble NSF attachment protein activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005798 Golgi-associated vesicle IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006004 fucose metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006898 receptor-mediated endocytosis IEP HCCA
BP GO:0006900 vesicle budding from membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008477 purine nucleosidase activity IEP HCCA
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP HCCA
MF GO:0008930 methylthioadenosine nucleosidase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
CC GO:0009504 cell plate IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009660 amyloplast organization IEP HCCA
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0009959 negative gravitropism IEP HCCA
BP GO:0009969 xyloglucan biosynthetic process IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010256 endomembrane system organization IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0016925 protein sumoylation IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019509 L-methionine salvage from methylthioadenosine IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
MF GO:0019798 procollagen-proline dioxygenase activity IEP HCCA
CC GO:0030133 transport vesicle IEP HCCA
CC GO:0030135 coated vesicle IEP HCCA
CC GO:0030136 clathrin-coated vesicle IEP HCCA
CC GO:0030139 endocytic vesicle IEP HCCA
CC GO:0030140 trans-Golgi network transport vesicle IEP HCCA
CC GO:0030173 integral component of Golgi membrane IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
BP GO:0030327 prenylated protein catabolic process IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031201 SNARE complex IEP HCCA
CC GO:0031228 intrinsic component of Golgi membrane IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
MF GO:0031543 peptidyl-proline dioxygenase activity IEP HCCA
MF GO:0031545 peptidyl-proline 4-dioxygenase activity IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0033843 xyloglucan 6-xylosyltransferase activity IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
MF GO:0035064 methylated histone binding IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0040007 growth IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0042353 fucose biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043102 amino acid salvage IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
CC GO:0045334 clathrin-coated endocytic vesicle IEP HCCA
BP GO:0045338 farnesyl diphosphate metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051740 ethylene binding IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0071265 L-methionine biosynthetic process IEP HCCA
BP GO:0071267 L-methionine salvage IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0072328 alkene binding IEP HCCA
BP GO:0072583 clathrin-dependent endocytosis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0140030 modification-dependent protein binding IEP HCCA
MF GO:0140034 methylation-dependent protein binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1902532 negative regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 209 258
PLAZA 3.0 Dicots AT3G09740