AT3G10390


Description : Flavin containing amine oxidoreductase family protein


Gene families : OG_01_0001899 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001899_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G10390
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
Cre07.g318651 No alias Lysine-specific histone demethylase 1 homolog 3 OS=Oryza... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_16040V3.1 No alias Flavin containing amine oxidoreductase family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
MF GO:0008131 primary amine oxidase activity ISS Interproscan
BP GO:0009851 auxin biosynthetic process RCA Interproscan
BP GO:0009911 positive regulation of flower development IMP Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem IMP Interproscan
BP GO:0010229 inflorescence development RCA Interproscan
BP GO:0016575 histone deacetylation IMP Interproscan
BP GO:0048825 cotyledon development RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000059 obsolete protein import into nucleus, docking IEP HCCA
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000712 resolution of meiotic recombination intermediates IEP HCCA
CC GO:0000785 chromatin IEP HCCA
CC GO:0000791 euchromatin IEP HCCA
CC GO:0000795 synaptonemal complex IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
CC GO:0000930 gamma-tubulin complex IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003923 GPI-anchor transamidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004407 histone deacetylase activity IEP HCCA
MF GO:0004843 thiol-dependent deubiquitinase IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005712 chiasma IEP HCCA
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006379 mRNA cleavage IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006482 protein demethylation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006611 protein export from nucleus IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006885 regulation of pH IEP HCCA
BP GO:0006892 post-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006896 Golgi to vacuole transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008187 poly-pyrimidine tract binding IEP HCCA
BP GO:0008214 protein dealkylation IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008242 omega peptidase activity IEP HCCA
MF GO:0008266 poly(U) RNA binding IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009292 genetic transfer IEP HCCA
BP GO:0009294 DNA mediated transformation IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
CC GO:0009898 cytoplasmic side of plasma membrane IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
BP GO:0009955 adaxial/abaxial pattern specification IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010065 primary meristem tissue development IEP HCCA
BP GO:0010068 protoderm histogenesis IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010154 fruit development IEP HCCA
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010589 leaf proximal/distal pattern formation IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0016246 RNA interference IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
BP GO:0016577 histone demethylation IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0019209 kinase activator activity IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
MF GO:0030295 protein kinase activator activity IEP HCCA
BP GO:0030422 production of siRNA involved in RNA interference IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
BP GO:0030641 regulation of cellular pH IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
BP GO:0031050 dsRNA processing IEP HCCA
BP GO:0031056 regulation of histone modification IEP HCCA
BP GO:0031057 negative regulation of histone modification IEP HCCA
BP GO:0031060 regulation of histone methylation IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0031538 negative regulation of anthocyanin metabolic process IEP HCCA
BP GO:0031935 obsolete regulation of chromatin silencing IEP HCCA
CC GO:0031965 nuclear membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032300 mismatch repair complex IEP HCCA
CC GO:0032389 MutLalpha complex IEP HCCA
CC GO:0032390 MutLbeta complex IEP HCCA
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033169 histone H3-K9 demethylation IEP HCCA
MF GO:0033558 protein deacetylase activity IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035064 methylated histone binding IEP HCCA
BP GO:0035065 regulation of histone acetylation IEP HCCA
BP GO:0035067 negative regulation of histone acetylation IEP HCCA
BP GO:0035194 post-transcriptional gene silencing by RNA IEP HCCA
BP GO:0035195 gene silencing by miRNA IEP HCCA
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP HCCA
MF GO:0035197 siRNA binding IEP HCCA
MF GO:0035198 miRNA binding IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0040030 regulation of molecular function, epigenetic IEP HCCA
BP GO:0042149 cellular response to glucose starvation IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043388 positive regulation of DNA binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0044764 multi-organism cellular process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045857 negative regulation of molecular function, epigenetic IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0047484 regulation of response to osmotic stress IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048468 cell development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048508 embryonic meristem development IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048530 fruit morphogenesis IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048645 animal organ formation IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048830 adventitious root development IEP HCCA
BP GO:0048864 stem cell development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051098 regulation of binding IEP HCCA
BP GO:0051099 positive regulation of binding IEP HCCA
BP GO:0051101 regulation of DNA binding IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051453 regulation of intracellular pH IEP HCCA
BP GO:0051570 regulation of histone H3-K9 methylation IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0055067 monovalent inorganic cation homeostasis IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070076 histone lysine demethylation IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP HCCA
BP GO:0070988 demethylation IEP HCCA
BP GO:0071215 cellular response to abscisic acid stimulus IEP HCCA
BP GO:0071396 cellular response to lipid IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080171 lytic vacuole organization IEP HCCA
BP GO:0080178 5-carbamoylmethyl uridine residue modification IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090342 regulation of cell aging IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0097306 cellular response to alcohol IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0098562 cytoplasmic side of membrane IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140030 modification-dependent protein binding IEP HCCA
MF GO:0140034 methylation-dependent protein binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
BP GO:1901000 regulation of response to salt stress IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901983 regulation of protein acetylation IEP HCCA
BP GO:1901984 negative regulation of protein acetylation IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
CC GO:1990391 DNA repair complex IEP HCCA
BP GO:2000024 regulation of leaf development IEP HCCA
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP HCCA
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 194 619
IPR007526 SWIRM 91 168
PLAZA 3.0 Dicots AT3G10390