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  5. AT1G12540

AT1G12540


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0001263 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12540
Cluster HCCA: Cluster_48


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
BP GO:0006012 galactose metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0008422 beta-glucosidase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009625 response to insect IEP HCCA
BP GO:0009682 induced systemic resistance IEP HCCA
BP GO:0009683 indoleacetic acid metabolic process IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009694 jasmonic acid metabolic process IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0009901 anther dehiscence IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010047 fruit dehiscence IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010110 regulation of photosynthesis, dark reaction IEP HCCA
MF GO:0010326 methionine-oxo-acid transaminase activity IEP HCCA
BP GO:0010438 cellular response to sulfur starvation IEP HCCA
BP GO:0010439 regulation of glucosinolate biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
BP GO:0016143 S-glycoside metabolic process IEP HCCA
BP GO:0016144 S-glycoside biosynthetic process IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034059 response to anoxia IEP HCCA
BP GO:0034599 cellular response to oxidative stress IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
BP GO:0034754 cellular hormone metabolic process IEP HCCA
MF GO:0035250 UDP-galactosyltransferase activity IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042762 regulation of sulfur metabolic process IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045912 negative regulation of carbohydrate metabolic process IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0047216 inositol 3-alpha-galactosyltransferase activity IEP HCCA
MF GO:0047782 coniferin beta-glucosidase activity IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071454 cellular response to anoxia IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0080102 3-methylthiopropyl glucosinolate S-oxygenase activity IEP HCCA
MF GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity IEP HCCA
MF GO:0080104 5-methylthiopropyl glucosinolate S-oxygenase activity IEP HCCA
MF GO:0080105 6-methylthiopropyl glucosinolate S-oxygenase activity IEP HCCA
MF GO:0080106 7-methylthiopropyl glucosinolate S-oxygenase activity IEP HCCA
MF GO:0080107 8-methylthiopropyl glucosinolate S-oxygenase activity IEP HCCA
BP GO:0080152 regulation of reductive pentose-phosphate cycle IEP HCCA
BP GO:0080153 negative regulation of reductive pentose-phosphate cycle IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP HCCA
BP GO:1900378 positive regulation of secondary metabolite biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901141 regulation of lignin biosynthetic process IEP HCCA
BP GO:1901428 regulation of syringal lignin biosynthetic process IEP HCCA
BP GO:1901430 positive regulation of syringal lignin biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901659 glycosyl compound biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903338 regulation of cell wall organization or biogenesis IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905156 negative regulation of photosynthesis IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000652 regulation of secondary cell wall biogenesis IEP HCCA
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 75 127
PLAZA 3.0 Dicots AT1G12540