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  5. AT1G12760

AT1G12760


Description : Zinc finger, C3HC4 type (RING finger) family protein


Gene families : OG_01_0000398 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12760
Cluster HCCA: Cluster_261


Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0000170 sphingosine hydroxylase activity IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0001727 lipid kinase activity IEP HCCA
MF GO:0001729 ceramide kinase activity IEP HCCA
BP GO:0002229 defense response to oomycetes IEP HCCA
BP GO:0002239 response to oomycetes IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity IEP HCCA
MF GO:0004709 MAP kinase kinase kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007568 aging IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009268 response to pH IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010044 response to aluminum ion IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0010260 animal organ senescence IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010447 response to acidic pH IEP HCCA
BP GO:0010449 root meristem growth IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015203 polyamine transmembrane transporter activity IEP HCCA
BP GO:0015846 polyamine transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016032 viral process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019779 Atg8 activating enzyme activity IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
BP GO:0022622 root system development IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of ion transmembrane transporter activity IEP HCCA
BP GO:0032922 circadian regulation of gene expression IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0035266 meristem growth IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043200 response to amino acid IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044070 regulation of anion transport IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0046786 viral replication complex formation and maintenance IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046967 cytosol to endoplasmic reticulum transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
MF GO:0070696 transmembrane receptor protein serine/threonine kinase binding IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901672 positive regulation of systemic acquired resistance IEP HCCA
BP GO:1902065 response to L-glutamate IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1903959 regulation of anion transmembrane transport IEP HCCA
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP HCCA
BP GO:2000028 regulation of photoperiodism, flowering IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 352 394
PLAZA 3.0 Dicots AT1G12760