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  5. AT3G13030

AT3G13030


Description : hAT transposon superfamily protein


Gene families : OG_01_0000532 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G13030
Cluster HCCA: Cluster_240


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000064 L-ornithine transmembrane transporter activity IEP HCCA
BP GO:0000105 histidine biosynthetic process IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0003002 regionalization IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003941 L-serine ammonia-lyase activity IEP HCCA
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004400 histidinol-phosphate transaminase activity IEP HCCA
MF GO:0005290 L-histidine transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005771 multivesicular body IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006730 one-carbon metabolic process IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007041 lysosomal transport IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008333 endosome to lysosome transport IEP HCCA
MF GO:0008721 D-serine ammonia-lyase activity IEP HCCA
MF GO:0008841 dihydrofolate synthase activity IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP HCCA
MF GO:0010348 lithium:proton antiporter activity IEP HCCA
BP GO:0010352 lithium ion export across the plasma membrane IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015173 aromatic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015174 basic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015179 L-amino acid transmembrane transporter activity IEP HCCA
MF GO:0015189 L-lysine transmembrane transporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016208 AMP binding IEP HCCA
BP GO:0016246 RNA interference IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016841 ammonia-lyase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0016929 SUMO-specific protease activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
BP GO:0023052 signaling IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
MF GO:0030378 serine racemase activity IEP HCCA
BP GO:0030422 production of siRNA involved in RNA interference IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030904 retromer complex IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031050 dsRNA processing IEP HCCA
CC GO:0031209 SCAR complex IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035194 post-transcriptional gene silencing by RNA IEP HCCA
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043624 cellular protein complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0046416 D-amino acid metabolic process IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0070178 D-serine metabolic process IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0070839 metal ion export IEP HCCA
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0140115 export across plasma membrane IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901474 azole transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR007021 DUF659 90 240
IPR008906 HATC_C_dom 451 526
PLAZA 3.0 Dicots AT3G13030