AT3G16340

Description : pleiotropic drug resistance 1

Gene families : OG_01_0000155 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G16340

Target	Alias	Description	ECC score	Gene Family Method
Cre09.g395750	No alias	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g07030.1	No alias	subfamily ABCG transporter	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g21340.1	No alias	subfamily ABCG transporter	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g21800.1	No alias	subfamily ABCG transporter	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g13070.1	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_9600V3.1	No alias	pleiotropic drug resistance 11	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_9340V3.1	No alias	pleiotropic drug resistance 12	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_6330V3.1	No alias	pleiotropic drug resistance 1	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_06850.1	No alias	no annotation	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006855	xenobiotic transmembrane transport	ISS	Interproscan
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009611	response to wounding	RCA	Interproscan
BP	GO:0009698	phenylpropanoid metabolic process	None	Extended
BP	GO:0009699	phenylpropanoid biosynthetic process	None	Extended
BP	GO:0009804	coumarin metabolic process	None	Extended
BP	GO:0009805	coumarin biosynthetic process	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
BP	GO:0015850	organic hydroxy compound transport	IDA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	ISS	Interproscan
BP	GO:0042908	xenobiotic transport	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043455	regulation of secondary metabolic process	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	None	Extended
BP	GO:1901140	p-coumaryl alcohol transport	IDA	Interproscan
BP	GO:1901141	regulation of lignin biosynthetic process	IMP	Interproscan
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:2000762	regulation of phenylpropanoid metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	HCCA
MF	GO:0000156	phosphorelay response regulator activity	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0000303	response to superoxide	IEP	HCCA
BP	GO:0000305	response to oxygen radical	IEP	HCCA
BP	GO:0003008	system process	IEP	HCCA
BP	GO:0003013	circulatory system process	IEP	HCCA
BP	GO:0003018	vascular process in circulatory system	IEP	HCCA
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	HCCA
MF	GO:0003993	acid phosphatase activity	IEP	HCCA
MF	GO:0004558	alpha-1,4-glucosidase activity	IEP	HCCA
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	HCCA
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	HCCA
BP	GO:0006812	cation transport	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010082	regulation of root meristem growth	IEP	HCCA
BP	GO:0010119	regulation of stomatal movement	IEP	HCCA
BP	GO:0010232	vascular transport	IEP	HCCA
BP	GO:0010233	phloem transport	IEP	HCCA
BP	GO:0010305	leaf vascular tissue pattern formation	IEP	HCCA
MF	GO:0015075	ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015662	P-type ion transporter activity	IEP	HCCA
MF	GO:0015926	glucosidase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	HCCA
BP	GO:0019722	calcium-mediated signaling	IEP	HCCA
BP	GO:0019932	second-messenger-mediated signaling	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
MF	GO:0022853	active ion transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0033037	polysaccharide localization	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0052386	cell wall thickening	IEP	HCCA
BP	GO:0052543	callose deposition in cell wall	IEP	HCCA
BP	GO:0052545	callose localization	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0080165	callose deposition in phloem sieve plate	IEP	HCCA
MF	GO:0090599	alpha-glucosidase activity	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
MF	GO:0140358	P-type transmembrane transporter activity	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR029481	ABC_trans_N	75	138
IPR003439	ABC_transporter-like_ATP-bd	842	994
IPR003439	ABC_transporter-like_ATP-bd	163	345
IPR013581	PDR_assoc	716	780
IPR013525	ABC_2_trans	499	710
IPR013525	ABC_2_trans	1140	1353

External Links

PLAZA 3.0 Dicots	AT3G16340

AT3G16340

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation