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  5. AT3G17620

AT3G17620


Description : F-box and associated interaction domains-containing protein


Gene families : OG_01_0000007 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17620
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G54550 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G67450 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G38590 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G13680 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G17500 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G18330 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G19560 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G20690 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G21120 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G21165 No alias No description available 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G22421 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G22700 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G22720 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G22730 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23680 No alias F-box associated ubiquitination effector family protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23685 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G04690 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10190 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10740 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G25195 No alias No description available 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G60560 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0010219 regulation of vernalization response IEP HCCA
BP GO:0010466 negative regulation of peptidase activity IEP HCCA
BP GO:0010951 negative regulation of endopeptidase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0030162 regulation of proteolysis IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0032269 negative regulation of cellular protein metabolic process IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0045861 negative regulation of proteolysis IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048442 sepal development IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0048832 specification of plant organ number IEP HCCA
BP GO:0048833 specification of floral organ number IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0052547 regulation of peptidase activity IEP HCCA
BP GO:0052548 regulation of endopeptidase activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 205 379
IPR001810 F-box_dom 3 45
PLAZA 3.0 Dicots AT3G17620