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AT3G19090


Description : RNA-binding protein


Gene families : OG_01_0001497 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G19090
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
Pp3c2_11250V3.1 No alias RNA-binding protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005093 Rab GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006108 malate metabolic process IEP HCCA
MF GO:0008553 P-type proton-exporting transporter activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015204 urea transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015645 fatty acid ligase activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
BP GO:0015840 urea transport IEP HCCA
MF GO:0016004 phospholipase activator activity IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP HCCA
BP GO:0019755 one-carbon compound transport IEP HCCA
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0050829 defense response to Gram-negative bacterium IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
CC GO:0051286 cell tip IEP HCCA
CC GO:0060187 cell pole IEP HCCA
MF GO:0060229 lipase activator activity IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 241 309
IPR009818 Ataxin-2_C 33 47
IPR006630 La_HTH 148 205
PLAZA 3.0 Dicots AT3G19090