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Description : late embryogenesis abundant protein-related / LEA protein-related
Gene families : OG_01_0000421 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000421_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G19430 | |
| Cluster | HCCA: Cluster_225 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Mp1g03490.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g08760.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c20_18650V3.1 | No alias | Late embryogenesis abundant (LEA) protein-related | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3s49_30V3.1 | No alias | Late embryogenesis abundant (LEA) protein-related | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | HCCA |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
| MF | GO:0004568 | chitinase activity | IEP | HCCA |
| MF | GO:0005199 | structural constituent of cell wall | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| BP | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone | IEP | HCCA |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | HCCA |
| MF | GO:0008446 | GDP-mannose 4,6-dehydratase activity | IEP | HCCA |
| BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | HCCA |
| CC | GO:0009505 | plant-type cell wall | IEP | HCCA |
| BP | GO:0009834 | plant-type secondary cell wall biogenesis | IEP | HCCA |
| MF | GO:0009927 | histidine phosphotransfer kinase activity | IEP | HCCA |
| BP | GO:0010053 | root epidermal cell differentiation | IEP | HCCA |
| BP | GO:0010054 | trichoblast differentiation | IEP | HCCA |
| MF | GO:0010427 | abscisic acid binding | IEP | HCCA |
| BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| BP | GO:0019646 | aerobic electron transport chain | IEP | HCCA |
| MF | GO:0019840 | isoprenoid binding | IEP | HCCA |
| BP | GO:0022904 | respiratory electron transport chain | IEP | HCCA |
| BP | GO:0030154 | cell differentiation | IEP | HCCA |
| CC | GO:0031225 | anchored component of membrane | IEP | HCCA |
| MF | GO:0031406 | carboxylic acid binding | IEP | HCCA |
| MF | GO:0033293 | monocarboxylic acid binding | IEP | HCCA |
| MF | GO:0042562 | hormone binding | IEP | HCCA |
| MF | GO:0043177 | organic acid binding | IEP | HCCA |
| MF | GO:0043178 | alcohol binding | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
| BP | GO:0048767 | root hair elongation | IEP | HCCA |
| BP | GO:0048829 | root cap development | IEP | HCCA |
| BP | GO:0048869 | cellular developmental process | IEP | HCCA |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | HCCA |
| BP | GO:0090627 | plant epidermal cell differentiation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009646 | Root_cap | 470 | 526 |
| PLAZA 3.0 Dicots | AT3G19430 |