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AT3G20920


Description : translocation protein-related


Gene families : OG_01_0003589 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G20920
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Pp3c27_5530V3.1 No alias translocation protein-related 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0016020 membrane ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
CC GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEP HCCA
MF GO:0004017 adenylate kinase activity IEP HCCA
MF GO:0004750 ribulose-phosphate 3-epimerase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0006352 DNA-templated transcription, initiation IEP HCCA
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006873 cellular ion homeostasis IEP HCCA
BP GO:0006878 cellular copper ion homeostasis IEP HCCA
BP GO:0006882 cellular zinc ion homeostasis IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009652 thigmotropism IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019211 phosphatase activator activity IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
BP GO:0030003 cellular cation homeostasis IEP HCCA
CC GO:0030134 COPII-coated ER to Golgi transport vesicle IEP HCCA
CC GO:0030135 coated vesicle IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035064 methylated histone binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
BP GO:0050801 ion homeostasis IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
BP GO:0055069 zinc ion homeostasis IEP HCCA
BP GO:0055070 copper ion homeostasis IEP HCCA
BP GO:0055080 cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0140030 modification-dependent protein binding IEP HCCA
MF GO:0140034 methylation-dependent protein binding IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004728 Sec62 107 232
PLAZA 3.0 Dicots AT3G20920