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AT3G22080


Description : TRAF-like family protein


Gene families : OG_01_0000182 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G22080
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G65370 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G69650 No alias TRAF-like family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G25330 No alias TRAF-like family protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G22085 No alias No description available 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 373 472
IPR002083 MATH/TRAF_dom 26 100
IPR002083 MATH/TRAF_dom 518 637
IPR002083 MATH/TRAF_dom 196 312
PLAZA 3.0 Dicots AT3G22080