1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G23790

AT3G23790


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG_01_0003186 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003186_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G23790
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Mp4g19160.1 No alias Probable acyl-activating enzyme 16, chloroplastic... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_17210V3.1 No alias AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003988 acetyl-CoA C-acyltransferase activity IEP HCCA
MF GO:0003994 aconitate hydratase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0005274 allantoin:proton symporter activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006101 citrate metabolic process IEP HCCA
BP GO:0006102 isocitrate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010111 glyoxysome organization IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
MF GO:0015334 high-affinity oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0015720 allantoin transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016408 C-acyltransferase activity IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019217 regulation of fatty acid metabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0031998 regulation of fatty acid beta-oxidation IEP HCCA
BP GO:0032365 intracellular lipid transport IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0042937 tripeptide transmembrane transporter activity IEP HCCA
BP GO:0042938 dipeptide transport IEP HCCA
BP GO:0042939 tripeptide transport IEP HCCA
BP GO:0043132 NAD transport IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044375 regulation of peroxisome size IEP HCCA
BP GO:0046320 regulation of fatty acid oxidation IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0050994 regulation of lipid catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0051791 medium-chain fatty acid metabolic process IEP HCCA
BP GO:0055072 iron ion homeostasis IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:0080093 regulation of photorespiration IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0098754 detoxification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1902652 secondary alcohol metabolic process IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
BP GO:2000028 regulation of photoperiodism, flowering IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 89 594
PLAZA 3.0 Dicots AT3G23790