AT3G26640

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0002754 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002754_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G26640
Cluster	HCCA: Cluster_51

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009648	photoperiodism	None	Extended
BP	GO:0009649	entrainment of circadian clock	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042752	regulation of circadian rhythm	None	Extended
BP	GO:0043153	entrainment of circadian clock by photoperiod	IEP	Interproscan
BP	GO:0048573	photoperiodism, flowering	IMP	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000373	Group II intron splicing	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	HCCA
MF	GO:0004300	enoyl-CoA hydratase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
MF	GO:0008419	RNA lariat debranching enzyme activity	IEP	HCCA
BP	GO:0008535	respiratory chain complex IV assembly	IEP	HCCA
MF	GO:0015203	polyamine transmembrane transporter activity	IEP	HCCA
BP	GO:0015846	polyamine transport	IEP	HCCA
MF	GO:0016289	CoA hydrolase activity	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016790	thiolester hydrolase activity	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
BP	GO:0017004	cytochrome complex assembly	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0046520	sphingoid biosynthetic process	IEP	HCCA
BP	GO:0097031	obsolete mitochondrial respiratory chain complex I biogenesis	IEP	HCCA
BP	GO:0097034	obsolete mitochondrial respiratory chain complex IV biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	263	296
IPR001680	WD40_repeat	174	205

External Links

PLAZA 3.0 Dicots	AT3G26640

AT3G26640

Expression Profile

Co-expression Networks

Functional Annotation