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  5. AT3G26922

AT3G26922


Description : F-box/RNI-like superfamily protein


Gene families : OG_01_0000027 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G26922
Cluster HCCA: Cluster_228


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004843 thiol-dependent deubiquitinase IEP HCCA
CC GO:0005677 chromatin silencing complex IEP HCCA
CC GO:0005697 telomerase holoenzyme complex IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008242 omega peptidase activity IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009561 megagametogenesis IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010099 regulation of photomorphogenesis IEP HCCA
BP GO:0010100 negative regulation of photomorphogenesis IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032206 positive regulation of telomere maintenance IEP HCCA
BP GO:0032210 regulation of telomere maintenance via telomerase IEP HCCA
BP GO:0032212 positive regulation of telomere maintenance via telomerase IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033477 S-methylmethionine metabolic process IEP HCCA
BP GO:0033528 S-methylmethionine cycle IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0051054 positive regulation of DNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1904356 regulation of telomere maintenance via telomere lengthening IEP HCCA
BP GO:1904358 positive regulation of telomere maintenance via telomere lengthening IEP HCCA
BP GO:2000030 regulation of response to red or far red light IEP HCCA
BP GO:2000278 regulation of DNA biosynthetic process IEP HCCA
BP GO:2000573 positive regulation of DNA biosynthetic process IEP HCCA
BP GO:2001252 positive regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 162 187
IPR001810 F-box_dom 15 51
PLAZA 3.0 Dicots AT3G26922