AT3G42960

Description : TAPETUM 1

Gene families : OG_01_0000297 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G42960
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT3G26770	No alias	NAD(P)-binding Rossmann-fold superfamily protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g02670.1	No alias	Zerumbone synthase OS=Zingiber zerumbet...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	ND	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009908	flower development	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010208	pollen wall assembly	None	Extended
BP	GO:0010584	pollen exine formation	RCA	Interproscan
BP	GO:0010927	cellular component assembly involved in morphogenesis	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016491	oxidoreductase activity	ISS	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090567	reproductive shoot system development	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
MF	GO:0003747	translation release factor activity	IEP	HCCA
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005788	endoplasmic reticulum lumen	IEP	HCCA
BP	GO:0006415	translational termination	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
MF	GO:0008079	translation termination factor activity	IEP	HCCA
BP	GO:0008216	spermidine metabolic process	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009555	pollen development	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009820	alkaloid metabolic process	IEP	HCCA
BP	GO:0009821	alkaloid biosynthetic process	IEP	HCCA
BP	GO:0009943	adaxial/abaxial axis specification	IEP	HCCA
BP	GO:0010152	pollen maturation	IEP	HCCA
BP	GO:0010199	organ boundary specification between lateral organs and the meristem	IEP	HCCA
MF	GO:0015271	outward rectifier potassium channel activity	IEP	HCCA
MF	GO:0015645	fatty acid ligase activity	IEP	HCCA
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016621	cinnamoyl-CoA reductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016843	amine-lyase activity	IEP	HCCA
MF	GO:0016844	strictosidine synthase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
MF	GO:0018685	alkane 1-monooxygenase activity	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0030638	polyketide metabolic process	IEP	HCCA
BP	GO:0030639	polyketide biosynthetic process	IEP	HCCA
MF	GO:0031956	medium-chain fatty acid-CoA ligase activity	IEP	HCCA
BP	GO:0032984	protein-containing complex disassembly	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
BP	GO:0035337	fatty-acyl-CoA metabolic process	IEP	HCCA
BP	GO:0035384	thioester biosynthetic process	IEP	HCCA
BP	GO:0035445	borate transmembrane transport	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
MF	GO:0042409	caffeoyl-CoA O-methyltransferase activity	IEP	HCCA
BP	GO:0043624	cellular protein complex disassembly	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0046713	borate transport	IEP	HCCA
MF	GO:0046715	active borate transmembrane transporter activity	IEP	HCCA
BP	GO:0046949	fatty-acyl-CoA biosynthetic process	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048316	seed development	IEP	HCCA
BP	GO:0048658	anther wall tapetum development	IEP	HCCA
BP	GO:0048859	formation of anatomical boundary	IEP	HCCA
MF	GO:0050734	hydroxycinnamoyltransferase activity	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0051791	medium-chain fatty acid metabolic process	IEP	HCCA
BP	GO:0051792	medium-chain fatty acid biosynthetic process	IEP	HCCA
BP	GO:0071616	acyl-CoA biosynthetic process	IEP	HCCA
MF	GO:0072532	tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity	IEP	HCCA
MF	GO:0072533	tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity	IEP	HCCA
MF	GO:0072547	tricoumaroylspermidine meta-hydroxylase activity	IEP	HCCA
MF	GO:0072548	dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity	IEP	HCCA
MF	GO:0072549	monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity	IEP	HCCA
MF	GO:0072550	triferuloylspermidine meta-hydroxylase activity	IEP	HCCA
MF	GO:0072551	diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity	IEP	HCCA
MF	GO:0072552	monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity	IEP	HCCA
MF	GO:0080012	trihydroxyferuloyl spermidine O-methyltransferase activity	IEP	HCCA
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	HCCA
MF	GO:0080030	methyl indole-3-acetate esterase activity	IEP	HCCA
MF	GO:0080072	spermidine:sinapoyl CoA N-acyltransferase activity	IEP	HCCA
MF	GO:0080073	spermidine:coumaroyl CoA N-acyltransferase activity	IEP	HCCA
MF	GO:0080074	spermidine:caffeoyl CoA N-acyltransferase activity	IEP	HCCA
MF	GO:0080075	spermidine:feruloyl CoA N-acyltransferase activity	IEP	HCCA
MF	GO:0080076	caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity	IEP	HCCA
MF	GO:0080077	trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity	IEP	HCCA
MF	GO:0080078	tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity	IEP	HCCA
BP	GO:0080088	spermidine hydroxycinnamate conjugate biosynthetic process	IEP	HCCA
BP	GO:0080110	sporopollenin biosynthetic process	IEP	HCCA
MF	GO:0090439	tetraketide alpha-pyrone synthase activity	IEP	HCCA
BP	GO:0090691	formation of plant organ boundary	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
BP	GO:1900150	regulation of defense response to fungus	IEP	HCCA

No InterPro domains available for this sequence

External Links

PLAZA 3.0 Dicots	AT3G42960

AT3G42960

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation