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Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_01_0002351 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002351_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G46870 | |
| Cluster | HCCA: Cluster_57 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005739 | mitochondrion | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| MF | GO:0008270 | zinc ion binding | IDA | Interproscan |
| CC | GO:0009507 | chloroplast | IDA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000162 | tryptophan biosynthetic process | IEP | HCCA |
| MF | GO:0004049 | anthranilate synthase activity | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006568 | tryptophan metabolic process | IEP | HCCA |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | HCCA |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | HCCA |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | HCCA |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0009309 | amine biosynthetic process | IEP | HCCA |
| CC | GO:0009505 | plant-type cell wall | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | HCCA |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042435 | indole-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0042586 | peptide deformylase activity | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043686 | co-translational protein modification | IEP | HCCA |
| BP | GO:0044106 | cellular amine metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046219 | indolalkylamine biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 141 | 189 |
| PLAZA 3.0 Dicots | AT3G46870 |