AT3G47830


Description : DNA glycosylase superfamily protein


Gene families : OG_01_0008738 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008738_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47830
Cluster HCCA: Cluster_57


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000162 tryptophan biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004049 anthranilate synthase activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005640 nuclear outer membrane IEP HCCA
CC GO:0005665 RNA polymerase II, core complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008618 7-methylguanosine metabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
CC GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0031965 nuclear membrane IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
CC GO:0035097 histone methyltransferase complex IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042278 purine nucleoside metabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0046128 purine ribonucleoside metabolic process IEP HCCA
BP GO:0046219 indolalkylamine biosynthetic process IEP HCCA
CC GO:0048188 Set1C/COMPASS complex IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901068 guanosine-containing compound metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003265 HhH-GPD_domain 101 242
PLAZA 3.0 Dicots AT3G47830