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  5. AT3G48810

AT3G48810


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0000212 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G48810
Cluster HCCA: Cluster_76


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0048445 carpel morphogenesis RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000098 sulfur amino acid catabolic process IEP HCCA
MF GO:0000257 nitrilase activity IEP HCCA
BP GO:0001709 cell fate determination IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001933 negative regulation of protein phosphorylation IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003923 GPI-anchor transamidase activity IEP HCCA
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004335 galactokinase activity IEP HCCA
MF GO:0004520 endodeoxyribonuclease activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0004708 MAP kinase kinase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005313 L-glutamate transmembrane transporter activity IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005771 multivesicular body IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006063 uronic acid metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006469 negative regulation of protein kinase activity IEP HCCA
BP GO:0006513 protein monoubiquitination IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006671 phytosphingosine metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0007006 mitochondrial membrane organization IEP HCCA
BP GO:0007007 inner mitochondrial membrane organization IEP HCCA
BP GO:0007032 endosome organization IEP HCCA
BP GO:0007041 lysosomal transport IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
BP GO:0008333 endosome to lysosome transport IEP HCCA
MF GO:0008509 anion transmembrane transporter activity IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0008660 1-aminocyclopropane-1-carboxylate deaminase activity IEP HCCA
MF GO:0009011 starch synthase activity IEP HCCA
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP HCCA
BP GO:0009093 cysteine catabolic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009866 induced systemic resistance, ethylene mediated signaling pathway IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015174 basic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015179 L-amino acid transmembrane transporter activity IEP HCCA
MF GO:0015189 L-lysine transmembrane transporter activity IEP HCCA
MF GO:0015386 potassium:proton antiporter activity IEP HCCA
BP GO:0015800 acidic amino acid transport IEP HCCA
BP GO:0015807 L-amino acid transport IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
MF GO:0016207 4-coumarate-CoA ligase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016815 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity IEP HCCA
MF GO:0017050 D-erythro-sphingosine kinase activity IEP HCCA
MF GO:0018024 histone-lysine N-methyltransferase activity IEP HCCA
MF GO:0019148 D-cysteine desulfhydrase activity IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019447 D-cysteine catabolic process IEP HCCA
BP GO:0019478 D-amino acid catabolic process IEP HCCA
BP GO:0019586 galacturonate metabolic process IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
MF GO:0022821 potassium ion antiporter activity IEP HCCA
BP GO:0030002 cellular anion homeostasis IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
BP GO:0030643 cellular phosphate ion homeostasis IEP HCCA
CC GO:0030904 retromer complex IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
BP GO:0032269 negative regulation of cellular protein metabolic process IEP HCCA
MF GO:0032942 inositol tetrakisphosphate 2-kinase activity IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033673 negative regulation of kinase activity IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0042278 purine nucleoside metabolic process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0042326 negative regulation of phosphorylation IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045039 protein insertion into mitochondrial inner membrane IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046128 purine ribonucleoside metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046396 D-galacturonate metabolic process IEP HCCA
BP GO:0046416 D-amino acid metabolic process IEP HCCA
BP GO:0046438 D-cysteine metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
BP GO:0046835 carbohydrate phosphorylation IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0046976 histone methyltransferase activity (H3-K27 specific) IEP HCCA
MF GO:0047560 3-dehydrosphinganine reductase activity IEP HCCA
MF GO:0047631 ADP-ribose diphosphatase activity IEP HCCA
MF GO:0047769 arogenate dehydratase activity IEP HCCA
MF GO:0047912 galacturonokinase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051204 protein insertion into mitochondrial membrane IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051348 negative regulation of transferase activity IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
MF GO:0051765 inositol tetrakisphosphate kinase activity IEP HCCA
BP GO:0051938 L-glutamate import IEP HCCA
BP GO:0055062 phosphate ion homeostasis IEP HCCA
BP GO:0070734 histone H3-K27 methylation IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0072502 cellular trivalent inorganic anion homeostasis IEP HCCA
BP GO:0072506 trivalent inorganic anion homeostasis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0080171 lytic vacuole organization IEP HCCA
BP GO:0080179 1-methylguanosine metabolic process IEP HCCA
BP GO:0090151 establishment of protein localization to mitochondrial membrane IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:1901068 guanosine-containing compound metabolic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1990019 protein storage vacuole organization IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
BP GO:2001289 lipid X metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 318 344
IPR002885 Pentatricopeptide_repeat 564 587
IPR002885 Pentatricopeptide_repeat 420 469
IPR002885 Pentatricopeptide_repeat 598 645
IPR002885 Pentatricopeptide_repeat 350 399
IPR002885 Pentatricopeptide_repeat 491 540
IPR002885 Pentatricopeptide_repeat 244 293
IPR002885 Pentatricopeptide_repeat 179 227
IPR002885 Pentatricopeptide_repeat 98 155
PLAZA 3.0 Dicots AT3G48810