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AT3G49400


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0008579 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G49400
Cluster HCCA: Cluster_82


Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP HCCA
BP GO:0000162 tryptophan biosynthetic process IEP HCCA
MF GO:0000217 DNA secondary structure binding IEP HCCA
CC GO:0000228 nuclear chromosome IEP HCCA
MF GO:0000400 four-way junction DNA binding IEP HCCA
BP GO:0000710 meiotic mismatch repair IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004067 asparaginase activity IEP HCCA
MF GO:0004106 chorismate mutase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005221 intracellular cyclic nucleotide activated cation channel activity IEP HCCA
MF GO:0005223 intracellular cGMP-activated cation channel activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005522 profilin binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006290 pyrimidine dimer repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
BP GO:0006516 glycoprotein catabolic process IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006530 asparagine catabolic process IEP HCCA
MF GO:0008142 oxysterol binding IEP HCCA
MF GO:0008780 acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity IEP HCCA
BP GO:0009065 glutamine family amino acid catabolic process IEP HCCA
BP GO:0009068 aspartate family amino acid catabolic process IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
BP GO:0009608 response to symbiont IEP HCCA
BP GO:0009895 negative regulation of catabolic process IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
BP GO:0016094 polyprenol biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
BP GO:0019408 dolichol biosynthetic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030581 symbiont intracellular protein transport in host IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031396 regulation of protein ubiquitination IEP HCCA
MF GO:0032135 DNA insertion or deletion binding IEP HCCA
MF GO:0032137 guanine/thymine mispair binding IEP HCCA
MF GO:0032138 single base insertion or deletion binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
CC GO:0032300 mismatch repair complex IEP HCCA
CC GO:0032301 MutSalpha complex IEP HCCA
BP GO:0032527 protein exit from endoplasmic reticulum IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
BP GO:0033345 asparagine catabolic process via L-aspartate IEP HCCA
MF GO:0035064 methylated histone binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0042177 negative regulation of protein catabolic process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043570 maintenance of DNA repeat elements IEP HCCA
MF GO:0043855 cyclic nucleotide-gated ion channel activity IEP HCCA
BP GO:0045910 negative regulation of DNA recombination IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046219 indolalkylamine biosynthetic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
BP GO:0080034 host response to induction by symbiont of tumor, nodule or growth in host IEP HCCA
MF GO:0099094 ligand-gated cation channel activity IEP HCCA
MF GO:0140030 modification-dependent protein binding IEP HCCA
MF GO:0140034 methylation-dependent protein binding IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1903320 regulation of protein modification by small protein conjugation or removal IEP HCCA
CC GO:1990391 DNA repair complex IEP HCCA
BP GO:2001289 lipid X metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024761 TFIIIC_delta_N 14 179
IPR001680 WD40_repeat 432 463
IPR001680 WD40_repeat 318 357
PLAZA 3.0 Dicots AT3G49400