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  5. AT3G53610

AT3G53610


Description : RAB GTPase homolog 8


Gene families : OG_01_0002524 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002524_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G53610
Cluster HCCA: Cluster_200


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000215 tRNA 2'-phosphotransferase activity IEP HCCA
MF GO:0000247 C-8 sterol isomerase activity IEP HCCA
MF GO:0000248 C-5 sterol desaturase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP HCCA
MF GO:0004656 procollagen-proline 4-dioxygenase activity IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005771 multivesicular body IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006638 neutral lipid metabolic process IEP HCCA
BP GO:0006639 acylglycerol metabolic process IEP HCCA
BP GO:0006641 triglyceride metabolic process IEP HCCA
BP GO:0006651 diacylglycerol biosynthetic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
CC GO:0009331 glycerol-3-phosphate dehydrogenase complex IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
MF GO:0018708 thiol S-methyltransferase activity IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019432 triglyceride biosynthetic process IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
MF GO:0019798 procollagen-proline dioxygenase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030544 Hsp70 protein binding IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
MF GO:0031543 peptidyl-proline dioxygenase activity IEP HCCA
MF GO:0031545 peptidyl-proline 4-dioxygenase activity IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0043181 vacuolar sequestering IEP HCCA
BP GO:0043182 vacuolar sequestering of sodium ion IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0046339 diacylglycerol metabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046460 neutral lipid biosynthetic process IEP HCCA
BP GO:0046463 acylglycerol biosynthetic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0060147 regulation of posttranscriptional gene silencing IEP HCCA
BP GO:0060964 regulation of gene silencing by miRNA IEP HCCA
BP GO:0060966 regulation of gene silencing by RNA IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070704 sterol desaturase activity IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
BP GO:0120178 steroid hormone biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 17 178
PLAZA 3.0 Dicots AT3G53610