AT3G54000


Description : CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG_01_0002525 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002525_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54000
Cluster HCCA: Cluster_38


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051457 maintenance of protein location in nucleus IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT3G54000