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  5. AT3G54360

AT3G54360


Description : zinc ion binding


Gene families : OG_01_0005391 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54360
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Mp2g14040.1 No alias Protein NCA1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:1902553 positive regulation of catalase activity IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000304 response to singlet oxygen IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
CC GO:0005779 integral component of peroxisomal membrane IEP HCCA
CC GO:0005782 peroxisomal matrix IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
BP GO:0006002 fructose 6-phosphate metabolic process IEP HCCA
BP GO:0006003 fructose 2,6-bisphosphate metabolic process IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006873 cellular ion homeostasis IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009638 phototropism IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009668 plastid membrane organization IEP HCCA
BP GO:0009704 de-etiolation IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
MF GO:0009881 photoreceptor activity IEP HCCA
MF GO:0009882 blue light photoreceptor activity IEP HCCA
CC GO:0009898 cytoplasmic side of plasma membrane IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
BP GO:0009903 chloroplast avoidance movement IEP HCCA
BP GO:0009904 chloroplast accumulation movement IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010027 thylakoid membrane organization IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010161 red light signaling pathway IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010190 cytochrome b6f complex assembly IEP HCCA
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP HCCA
BP GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP HCCA
BP GO:0010360 negative regulation of anion channel activity IEP HCCA
BP GO:0010361 regulation of anion channel activity by blue light IEP HCCA
BP GO:0010362 negative regulation of anion channel activity by blue light IEP HCCA
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP HCCA
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP HCCA
BP GO:0010423 negative regulation of brassinosteroid biosynthetic process IEP HCCA
BP GO:0010600 regulation of auxin biosynthetic process IEP HCCA
BP GO:0010617 circadian regulation of calcium ion oscillation IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
BP GO:0010894 negative regulation of steroid biosynthetic process IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
BP GO:0016560 protein import into peroxisome matrix, docking IEP HCCA
MF GO:0016688 L-ascorbate peroxidase activity IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019218 regulation of steroid metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019747 regulation of isoprenoid metabolic process IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0030003 cellular cation homeostasis IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031231 intrinsic component of peroxisomal membrane IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
CC GO:0031897 Tic complex IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0031907 microbody lumen IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0032350 regulation of hormone metabolic process IEP HCCA
BP GO:0032351 negative regulation of hormone metabolic process IEP HCCA
BP GO:0032353 negative regulation of hormone biosynthetic process IEP HCCA
BP GO:0032410 negative regulation of transporter activity IEP HCCA
BP GO:0032413 negative regulation of ion transmembrane transporter activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034763 negative regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of ion transmembrane transport IEP HCCA
BP GO:0034766 negative regulation of ion transmembrane transport IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036473 cell death in response to oxidative stress IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043269 regulation of ion transport IEP HCCA
BP GO:0043271 negative regulation of ion transport IEP HCCA
BP GO:0043609 regulation of carbon utilization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044257 cellular protein catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
BP GO:0045037 protein import into chloroplast stroma IEP HCCA
BP GO:0045038 protein import into chloroplast thylakoid membrane IEP HCCA
BP GO:0045833 negative regulation of lipid metabolic process IEP HCCA
BP GO:0045939 negative regulation of steroid metabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0046885 regulation of hormone biosynthetic process IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
BP GO:0050801 ion homeostasis IEP HCCA
BP GO:0050810 regulation of steroid biosynthetic process IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051051 negative regulation of transport IEP HCCA
BP GO:0051055 negative regulation of lipid biosynthetic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055080 cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0061077 chaperone-mediated protein folding IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071071 regulation of phospholipid biosynthetic process IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071491 cellular response to red light IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP HCCA
BP GO:0072507 divalent inorganic cation homeostasis IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP HCCA
BP GO:0090032 negative regulation of steroid hormone biosynthetic process IEP HCCA
BP GO:0090056 regulation of chlorophyll metabolic process IEP HCCA
BP GO:0090342 regulation of cell aging IEP HCCA
BP GO:0090354 regulation of auxin metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0098562 cytoplasmic side of membrane IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902395 regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:1903725 regulation of phospholipid metabolic process IEP HCCA
BP GO:1903792 negative regulation of anion transport IEP HCCA
BP GO:1903960 negative regulation of anion transmembrane transport IEP HCCA
BP GO:1904062 regulation of cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT3G54360