AT3G54540

Description : general control non-repressible 4

Gene families : OG_01_0006856 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006856_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G54540
Cluster	HCCA: Cluster_145

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006089	lactate metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009438	methylglyoxal metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	RCA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0042180	cellular ketone metabolic process	None	Extended
BP	GO:0042182	ketone catabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0046185	aldehyde catabolic process	None	Extended
BP	GO:0051596	methylglyoxal catabolic process	None	Extended
BP	GO:0061727	methylglyoxal catabolic process to lactate	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0003978	UDP-glucose 4-epimerase activity	IEP	HCCA
MF	GO:0004108	citrate (Si)-synthase activity	IEP	HCCA
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006007	glucose catabolic process	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006152	purine nucleoside catabolic process	IEP	HCCA
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	HCCA
BP	GO:0006218	uridine catabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
MF	GO:0008477	purine nucleosidase activity	IEP	HCCA
CC	GO:0008540	proteasome regulatory particle, base subcomplex	IEP	HCCA
MF	GO:0008559	ABC-type xenobiotic transporter activity	IEP	HCCA
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	HCCA
MF	GO:0008970	phospholipase A1 activity	IEP	HCCA
BP	GO:0009119	ribonucleoside metabolic process	IEP	HCCA
BP	GO:0009164	nucleoside catabolic process	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009590	detection of gravity	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009627	systemic acquired resistance	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009660	amyloplast organization	IEP	HCCA
BP	GO:0009687	abscisic acid metabolic process	IEP	HCCA
BP	GO:0009688	abscisic acid biosynthetic process	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009959	negative gravitropism	IEP	HCCA
BP	GO:0009960	endosperm development	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
BP	GO:0015074	DNA integration	IEP	HCCA
MF	GO:0015446	ATPase-coupled arsenite transmembrane transporter activity	IEP	HCCA
BP	GO:0015700	arsenite transport	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	HCCA
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	HCCA
BP	GO:0016925	protein sumoylation	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019320	hexose catabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
MF	GO:0019948	SUMO activating enzyme activity	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	HCCA
MF	GO:0036440	citrate synthase activity	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
BP	GO:0042278	purine nucleoside metabolic process	IEP	HCCA
BP	GO:0042454	ribonucleoside catabolic process	IEP	HCCA
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	HCCA
BP	GO:0042946	glucoside transport	IEP	HCCA
MF	GO:0042947	glucoside transmembrane transporter activity	IEP	HCCA
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0043288	apocarotenoid metabolic process	IEP	HCCA
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
MF	GO:0045437	uridine nucleosidase activity	IEP	HCCA
BP	GO:0046108	uridine metabolic process	IEP	HCCA
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	HCCA
BP	GO:0046133	pyrimidine ribonucleoside catabolic process	IEP	HCCA
BP	GO:0046135	pyrimidine nucleoside catabolic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046365	monosaccharide catabolic process	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
MF	GO:0046912	acyltransferase, acyl groups converted into alkyl on transfer	IEP	HCCA
MF	GO:0047622	adenosine nucleosidase activity	IEP	HCCA
MF	GO:0047724	inosine nucleosidase activity	IEP	HCCA
MF	GO:0050263	ribosylpyrimidine nucleosidase activity	IEP	HCCA
MF	GO:0050373	UDP-arabinose 4-epimerase activity	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	HCCA
BP	GO:0061416	obsolete regulation of transcription from RNA polymerase II promoter in response to salt stress	IEP	HCCA
MF	GO:0070063	RNA polymerase binding	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0072523	purine-containing compound catabolic process	IEP	HCCA
BP	GO:0072529	pyrimidine-containing compound catabolic process	IEP	HCCA
MF	GO:0072585	xanthosine nucleotidase activity	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
BP	GO:0080129	proteasome core complex assembly	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
BP	GO:0120255	olefinic compound biosynthetic process	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901656	glycoside transport	IEP	HCCA
MF	GO:1901683	arsenate ion transmembrane transporter activity	IEP	HCCA
MF	GO:1902417	(+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	IEP	HCCA
BP	GO:1902418	(+)-abscisic acid D-glucopyranosyl ester transmembrane transport	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
BP	GO:1902644	tertiary alcohol metabolic process	IEP	HCCA
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	178	348
IPR003439	ABC_transporter-like_ATP-bd	513	648

External Links

PLAZA 3.0 Dicots	AT3G54540

AT3G54540

Expression Profile

Co-expression Networks

Functional Annotation