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  5. AT3G55860

AT3G55860


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0006162 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55860
Cluster HCCA: Cluster_108


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP HCCA
MF GO:0004029 aldehyde dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004031 aldehyde oxidase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004805 trehalose-phosphatase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006349 regulation of gene expression by genetic imprinting IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0009996 negative regulation of cell fate specification IEP HCCA
BP GO:0010023 proanthocyanidin biosynthetic process IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010061 regulation of trichoblast fate specification IEP HCCA
BP GO:0010062 negative regulation of trichoblast fate specification IEP HCCA
BP GO:0010191 mucilage metabolic process IEP HCCA
BP GO:0010192 mucilage biosynthetic process IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP HCCA
BP GO:0010453 regulation of cell fate commitment IEP HCCA
BP GO:0010454 negative regulation of cell fate commitment IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
MF GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016707 gibberellin 3-beta-dioxygenase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0018479 benzaldehyde dehydrogenase (NAD+) activity IEP HCCA
MF GO:0018488 aryl-aldehyde oxidase activity IEP HCCA
MF GO:0019115 benzaldehyde dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042659 regulation of cell fate specification IEP HCCA
CC GO:0043076 megasporocyte nucleus IEP HCCA
CC GO:0043078 polar nucleus IEP HCCA
MF GO:0045544 gibberellin 20-oxidase activity IEP HCCA
BP GO:0045596 negative regulation of cell differentiation IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046688 response to copper ion IEP HCCA
BP GO:0048317 seed morphogenesis IEP HCCA
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP HCCA
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP HCCA
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0070529 L-tryptophan aminotransferase activity IEP HCCA
BP GO:0071514 genetic imprinting IEP HCCA
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP HCCA
BP GO:0080113 regulation of seed growth IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903888 regulation of plant epidermal cell differentiation IEP HCCA
BP GO:1903889 negative regulation of plant epidermal cell differentiation IEP HCCA
BP GO:1905421 regulation of plant organ morphogenesis IEP HCCA
BP GO:2000014 regulation of endosperm development IEP HCCA
BP GO:2000067 regulation of root morphogenesis IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT3G55860