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  5. AT3G57790

AT3G57790


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0004544 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G57790
Cluster HCCA: Cluster_249


Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
BP GO:0005975 carbohydrate metabolic process ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0000719 photoreactive repair IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0005261 cation channel activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
MF GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006290 pyrimidine dimer repair IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006491 N-glycan processing IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
MF GO:0009044 xylan 1,4-beta-xylosidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009757 hexose mediated signaling IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP HCCA
CC GO:0009925 basal plasma membrane IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010039 response to iron ion IEP HCCA
BP GO:0010255 glucose mediated signaling pathway IEP HCCA
BP GO:0010350 cellular response to magnesium starvation IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010555 response to mannitol IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016262 protein N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0018008 N-terminal peptidyl-glycine N-myristoylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018201 peptidyl-glycine modification IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031111 negative regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031113 regulation of microtubule polymerization IEP HCCA
BP GO:0031114 regulation of microtubule depolymerization IEP HCCA
BP GO:0031115 negative regulation of microtubule polymerization IEP HCCA
BP GO:0031117 positive regulation of microtubule depolymerization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032026 response to magnesium ion IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035864 response to potassium ion IEP HCCA
BP GO:0035865 cellular response to potassium ion IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
MF GO:0043325 phosphatidylinositol-3,4-bisphosphate binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044347 cell wall polysaccharide catabolic process IEP HCCA
BP GO:0044766 multi-organism transport IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045493 xylan catabolic process IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
CC GO:0046658 anchored component of plasma membrane IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046688 response to copper ion IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051495 positive regulation of cytoskeleton organization IEP HCCA
BP GO:0051511 negative regulation of unidimensional cell growth IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0051704 multi-organism process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071219 cellular response to molecule of bacterial origin IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071280 cellular response to copper ion IEP HCCA
BP GO:0071281 cellular response to iron ion IEP HCCA
BP GO:0071286 cellular response to magnesium ion IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071322 cellular response to carbohydrate stimulus IEP HCCA
BP GO:0071325 cellular response to mannitol stimulus IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072708 response to sorbitol IEP HCCA
BP GO:0072709 cellular response to sorbitol IEP HCCA
BP GO:0075733 intracellular transport of virus IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:0097599 xylanase activity IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1901881 positive regulation of protein depolymerization IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
BP GO:1902579 multi-organism localization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
BP GO:1902905 positive regulation of supramolecular fiber organization IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 112 391
PLAZA 3.0 Dicots AT3G57790