Coexpression cluster: Cluster_249 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0065007 biological regulation 51.67% (31/60) 1.47 0.0 7e-06
GO:0015250 water channel activity 6.67% (4/60) 5.64 1e-06 0.000203
GO:0005372 water transmembrane transporter activity 6.67% (4/60) 5.64 1e-06 0.000203
GO:0050789 regulation of biological process 43.33% (26/60) 1.37 1e-06 0.000315
GO:0050794 regulation of cellular process 40.0% (24/60) 1.49 1e-06 0.000363
GO:0065008 regulation of biological quality 16.67% (10/60) 2.59 5e-06 0.000729
GO:0015267 channel activity 8.33% (5/60) 4.02 1.4e-05 0.001464
GO:0022803 passive transmembrane transporter activity 8.33% (5/60) 4.02 1.4e-05 0.001464
GO:0010476 gibberellin mediated signaling pathway 6.67% (4/60) 4.58 2.4e-05 0.001947
GO:0009740 gibberellic acid mediated signaling pathway 6.67% (4/60) 4.6 2.3e-05 0.002054
GO:0030003 cellular cation homeostasis 8.33% (5/60) 3.8 3.1e-05 0.002257
GO:0009882 blue light photoreceptor activity 3.33% (2/60) 7.53 4.6e-05 0.002486
GO:0009743 response to carbohydrate 10.0% (6/60) 3.21 4.6e-05 0.002642
GO:0006873 cellular ion homeostasis 8.33% (5/60) 3.72 3.9e-05 0.002662
GO:0055082 cellular chemical homeostasis 8.33% (5/60) 3.69 4.4e-05 0.002737
GO:0009628 response to abiotic stimulus 28.33% (17/60) 1.5 5.6e-05 0.00284
GO:1901700 response to oxygen-containing compound 23.33% (14/60) 1.7 6.8e-05 0.002892
GO:0019725 cellular homeostasis 8.33% (5/60) 3.56 6.8e-05 0.00304
GO:0051234 establishment of localization 28.33% (17/60) 1.46 7.7e-05 0.003095
GO:0050896 response to stimulus 43.33% (26/60) 1.06 6.7e-05 0.00317
GO:0043479 pigment accumulation in tissues in response to UV light 6.67% (4/60) 4.03 0.000108 0.003237
GO:0043473 pigmentation 6.67% (4/60) 4.03 0.000108 0.003237
GO:0043476 pigment accumulation 6.67% (4/60) 4.03 0.000108 0.003237
GO:0043481 anthocyanin accumulation in tissues in response to UV light 6.67% (4/60) 4.03 0.000108 0.003237
GO:0043478 pigment accumulation in response to UV light 6.67% (4/60) 4.03 0.000108 0.003237
GO:0043480 pigment accumulation in tissues 6.67% (4/60) 4.03 0.000108 0.003237
GO:0055080 cation homeostasis 8.33% (5/60) 3.46 9.4e-05 0.003607
GO:0050801 ion homeostasis 8.33% (5/60) 3.33 0.00014 0.004059
GO:0014070 response to organic cyclic compound 10.0% (6/60) 2.89 0.000154 0.004308
GO:0009881 photoreceptor activity 3.33% (2/60) 6.68 0.000165 0.00445
GO:0009639 response to red or far red light 10.0% (6/60) 2.84 0.000191 0.004688
GO:0051179 localization 28.33% (17/60) 1.36 0.000182 0.00474
GO:0009416 response to light stimulus 16.67% (10/60) 1.98 0.00019 0.004804
GO:0009986 cell surface 3.33% (2/60) 6.53 0.000206 0.004901
GO:0006833 water transport 6.67% (4/60) 3.71 0.000253 0.005685
GO:0042044 fluid transport 6.67% (4/60) 3.71 0.000253 0.005685
GO:0009750 response to fructose 6.67% (4/60) 3.68 0.000274 0.005994
GO:0032502 developmental process 30.0% (18/60) 1.26 0.000284 0.006042
GO:0048878 chemical homeostasis 8.33% (5/60) 3.08 0.000317 0.006408
GO:0009314 response to radiation 16.67% (10/60) 1.89 0.000313 0.006495
GO:0009638 phototropism 3.33% (2/60) 6.15 0.000356 0.007015
GO:0010162 seed dormancy process 6.67% (4/60) 3.55 0.000381 0.007332
GO:0022611 dormancy process 6.67% (4/60) 3.54 0.00039 0.007336
GO:0042592 homeostatic process 8.33% (5/60) 2.99 0.000424 0.007799
GO:0009746 response to hexose 6.67% (4/60) 3.49 0.000449 0.00807
GO:0009641 shade avoidance 3.33% (2/60) 5.94 0.000477 0.008215
GO:0034284 response to monosaccharide 6.67% (4/60) 3.46 0.000492 0.008285
GO:0016773 phosphotransferase activity, alcohol group as acceptor 11.67% (7/60) 2.32 0.000476 0.008376
GO:0007030 Golgi organization 6.67% (4/60) 3.38 0.000598 0.009874
GO:0006810 transport 25.0% (15/60) 1.33 0.000623 0.010075
GO:0015318 inorganic molecular entity transmembrane transporter activity 10.0% (6/60) 2.47 0.000735 0.011662
GO:0009741 response to brassinosteroid 5.0% (3/60) 4.08 0.000761 0.011842
GO:0009605 response to external stimulus 20.0% (12/60) 1.49 0.000955 0.014577
GO:0009651 response to salt stress 11.67% (7/60) 2.04 0.001479 0.022154
GO:0016020 membrane 33.33% (20/60) 0.97 0.001552 0.022425
GO:0048609 multicellular organismal reproductive process 6.67% (4/60) 3.02 0.001529 0.022485
GO:0009889 regulation of biosynthetic process 20.0% (12/60) 1.4 0.001601 0.02273
GO:0019200 carbohydrate kinase activity 3.33% (2/60) 5.04 0.001687 0.023535
GO:0032501 multicellular organismal process 18.33% (11/60) 1.46 0.001831 0.025108
GO:0006970 response to osmotic stress 11.67% (7/60) 1.95 0.002174 0.027053
GO:0006816 calcium ion transport 5.0% (3/60) 3.55 0.002171 0.027439
GO:0009411 response to UV 6.67% (4/60) 2.9 0.002046 0.027592
GO:0005997 xylulose metabolic process 1.67% (1/60) 8.85 0.00217 0.02786
GO:0005222 intracellular cAMP-activated cation channel activity 1.67% (1/60) 8.85 0.00217 0.02786
GO:0009702 L-arabinokinase activity 1.67% (1/60) 8.85 0.00217 0.02786
GO:0010033 response to organic substance 20.0% (12/60) 1.33 0.002363 0.028963
GO:0008150 biological_process 90.0% (54/60) 0.27 0.002491 0.030082
GO:0042221 response to chemical 25.0% (15/60) 1.13 0.002539 0.030205
GO:0010556 regulation of macromolecule biosynthetic process 18.33% (11/60) 1.39 0.002773 0.031599
GO:2000112 regulation of cellular macromolecule biosynthetic process 18.33% (11/60) 1.39 0.002762 0.031922
GO:0009637 response to blue light 5.0% (3/60) 3.43 0.002734 0.032055
GO:0019321 pentose metabolic process 3.33% (2/60) 4.6 0.003095 0.034771
GO:0031326 regulation of cellular biosynthetic process 18.33% (11/60) 1.35 0.003349 0.03711
GO:0010360 negative regulation of anion channel activity 1.67% (1/60) 7.85 0.004335 0.038116
GO:0034763 negative regulation of transmembrane transport 1.67% (1/60) 7.85 0.004335 0.038116
GO:0008886 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity 1.67% (1/60) 7.85 0.004335 0.038116
GO:1903792 negative regulation of anion transport 1.67% (1/60) 7.85 0.004335 0.038116
GO:0007263 nitric oxide mediated signal transduction 1.67% (1/60) 7.85 0.004335 0.038116
GO:0015200 methylammonium transmembrane transporter activity 1.67% (1/60) 7.85 0.004335 0.038116
GO:0010361 regulation of anion channel activity by blue light 1.67% (1/60) 7.85 0.004335 0.038116
GO:0004856 xylulokinase activity 1.67% (1/60) 7.85 0.004335 0.038116
GO:0019566 arabinose metabolic process 1.67% (1/60) 7.85 0.004335 0.038116
GO:0032410 negative regulation of transporter activity 1.67% (1/60) 7.85 0.004335 0.038116
GO:0051513 regulation of monopolar cell growth 1.67% (1/60) 7.85 0.004335 0.038116
GO:0032413 negative regulation of ion transmembrane transporter activity 1.67% (1/60) 7.85 0.004335 0.038116
GO:0034766 negative regulation of ion transmembrane transport 1.67% (1/60) 7.85 0.004335 0.038116
GO:0010362 negative regulation of anion channel activity by blue light 1.67% (1/60) 7.85 0.004335 0.038116
GO:1903960 negative regulation of anion transmembrane transport 1.67% (1/60) 7.85 0.004335 0.038116
GO:2001141 regulation of RNA biosynthetic process 16.67% (10/60) 1.38 0.004602 0.038782
GO:0016772 transferase activity, transferring phosphorus-containing groups 15.0% (9/60) 1.53 0.003617 0.03902
GO:0006355 regulation of transcription, DNA-templated 16.67% (10/60) 1.38 0.004584 0.039036
GO:1903506 regulation of nucleic acid-templated transcription 16.67% (10/60) 1.38 0.004584 0.039036
GO:0009751 response to salicylic acid 5.0% (3/60) 3.29 0.00359 0.03925
GO:0007165 signal transduction 15.0% (9/60) 1.48 0.004528 0.039386
GO:0051252 regulation of RNA metabolic process 16.67% (10/60) 1.36 0.004882 0.040714
GO:0046777 protein autophosphorylation 5.0% (3/60) 3.23 0.004035 0.042391
GO:0009755 hormone-mediated signaling pathway 10.0% (6/60) 1.98 0.004014 0.042731
GO:0038023 signaling receptor activity 3.33% (2/60) 4.18 0.005512 0.045502
GO:0016301 kinase activity 13.33% (8/60) 1.55 0.005664 0.045824
GO:0004672 protein kinase activity 8.33% (5/60) 2.12 0.005828 0.046225
GO:0009606 tropism 5.0% (3/60) 3.06 0.005657 0.046229
GO:0033993 response to lipid 10.0% (6/60) 1.87 0.00578 0.046294
GO:0019219 regulation of nucleobase-containing compound metabolic process 16.67% (10/60) 1.32 0.006047 0.047036
GO:0005975 carbohydrate metabolic process 13.33% (8/60) 1.53 0.006045 0.047479
GO:0006996 organelle organization 13.33% (8/60) 1.53 0.006214 0.047877
GO:0010074 maintenance of meristem identity 3.33% (2/60) 4.04 0.006612 0.048187
GO:0080090 regulation of primary metabolic process 18.33% (11/60) 1.22 0.006556 0.04822
GO:0005886 plasma membrane 23.33% (14/60) 1.03 0.006698 0.048383
GO:0048767 root hair elongation 5.0% (3/60) 2.98 0.006544 0.048568
GO:0009925 basal plasma membrane 1.67% (1/60) 7.26 0.006495 0.048652
GO:0043153 entrainment of circadian clock by photoperiod 1.67% (1/60) 7.26 0.006495 0.048652
GO:0016328 lateral plasma membrane 1.67% (1/60) 7.26 0.006495 0.048652
GO:0008361 regulation of cell size 3.33% (2/60) 4.02 0.006843 0.048988
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_14 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_18 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_29 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_36 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_43 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_47 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_50 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_65 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_69 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_82 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_85 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_100 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_112 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_115 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_120 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_125 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_141 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_143 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_146 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_150 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_173 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_177 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_180 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_186 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_189 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_196 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_212 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_219 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_223 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_242 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_258 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_50 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_146 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_14 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_15 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_23 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_25 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_101 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_1 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_8 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_16 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_22 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_23 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_27 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_64 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_86 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_105 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_108 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_112 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_168 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_194 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_195 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_201 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_218 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_230 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_260 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_283 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_298 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_457 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_66 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_68 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_137 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (60) (download table)

InterPro Domains

GO Terms

Family Terms