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AT3G58440


Description : TRAF-like superfamily protein


Gene families : OG_01_0000081 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58440
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT1G31370 No alias Ubiquitin-specific protease family C19-related protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31380 No alias TRAF-like family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31390 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31400 No alias TRAF-like family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05410 No alias TRAF-like family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05420 No alias TRAF-like family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42455 No alias No description available 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42460 No alias TRAF-like family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42465 No alias No description available 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42470 No alias TRAF-like family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42475 No alias No description available 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42480 No alias TRAF-like family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44790 No alias TRAF-like family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44805 No alias TRAF-like superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58210 No alias TRAF-like family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58230 No alias Ubiquitin-specific protease family C19-related protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58280 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58340 No alias TRAF-like family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58370 No alias TRAF-like family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58400 No alias TRAF-like family protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58420 No alias TRAF-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006360 transcription by RNA polymerase I IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 16 133
PLAZA 3.0 Dicots AT3G58440